FastQCFastQC Report
Fri 3 Feb 2023
EGAF00006420449

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006420449
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1264545
Sequences flagged as poor quality0
Sequence length101
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG18480.14613952053900808No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA17890.14147381073824972No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)