FastQCFastQC Report
Thu 3 Nov 2022
EGAF00006465101

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006465101
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51735369
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCA779430.15065708722402268No Hit
CCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCAC566290.10945896607019465No Hit
CTCCATCGCAGTAACCAGAAGTACAGGAATATTAACCTGTTTCCCATCGA553300.10694811126214254No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)