FastQCFastQC Report
Thu 21 Jul 2022
EGAF00006469144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006469144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2971307
Sequences flagged as poor quality0
Sequence length36-150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGATCAGCAAAAGCAGGGTGACAAAAACATAATGGATCCAAACAC58000.19520029401202904No Hit
ACGCGTGATCAGTAGAAACAAGGGTGTTTTTTAGTACTAAATAAGCTGAA47650.16036713809781353No Hit
ACGCGTGATCAGCAAAAGCAGGTAGATATTGAAAGATGAGTCTTCTAACC47240.15898727395048712No Hit
ACGCGTGATCAGTAGAAACAAGGTAGTTTTTTACTCCAGCTCTATGCTGA40590.13660655058531482No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)