FastQCFastQC Report
Tue 26 Jul 2022
EGAF00006469145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006469145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2971307
Sequences flagged as poor quality0
Sequence length36-150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGATCAGCAAAAGCAGGGTGACAAAAACATAATGGATCCAAACAC56410.189849113538251No Hit
ACGCGTGATCAGTAGAAACAAGGGTGTTTTTTAGTACTAAATAAGCTGAA47440.15966037841259756No Hit
ACGCGTGATCAGCAAAAGCAGGTAGATATTGAAAGATGAGTCTTCTAACC45290.1524245054449103No Hit
ACGCGTGATCAGTAGAAACAAGGTAGTTTTTTACTCCAGCTCTATGCTGA35830.1205866643870862No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)