FastQCFastQC Report
Tue 26 Jul 2022
EGAF00006469180

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006469180
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1185445
Sequences flagged as poor quality0
Sequence length36-150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACATCCTCGGT18100.15268527852409855No Hit
GTTCGTTTCGCAGCATTCCAGCTACTTTTGTTGCTCCCTGCTCATCCTTG12250.10333672165305013No Hit
GGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACATCCTCGG11990.1011434524587813No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)