FastQCFastQC Report
Tue 26 Jul 2022
EGAF00006469252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006469252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2843512
Sequences flagged as poor quality0
Sequence length36-150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGATCAGCAAAAGCAGGACTGGTTGATATCCTGGGTGCCAGCGGT107180.3769282492917209No Hit
ACGCGTGATCAGCAAAAGCAGGAAAACCAGATTAAAGCGGTACGTTCCTT93340.3282560439344022No Hit
ACGCGTGATCAGTAGAAACAAGGGTGTTTTTCTTTATTATATACATATCC69310.24374787234940454No Hit
ACGCGTGATCAGCAAAAGCAGGAAATAGAATCGGTAAAGCTAGAAAATCT41750.14682547497601556No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)