FastQCFastQC Report
Tue 26 Jul 2022
EGAF00006469303

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006469303
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3575138
Sequences flagged as poor quality0
Sequence length36-150
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCGTGATCAGTAGAAACAAGGCACTTTTTCCAGTTTATTTGCTGACAT64390.18010493580947085No Hit
ACGCGTGATCAGCAAAAGCAGGACTAGCAGAAAAGTTACACTGTTGGTTT58680.1641335243562626No Hit
ACGCGTGATCAGCAAAAGCAGGCTTTCTCGTTAGTGGCAAGTATGACCCA48960.136945762653078No Hit
ACGCGTGATCAGTAGAAACAAGGGCATTTTTCACTCAATTGCGTTCATTG45770.12802303015995467No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)