FastQCFastQC Report
Sun 12 May 2024
EGAF00006473908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006473908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112425959
Total Bases8.4 Gbp
Sequences flagged as poor quality0
Sequence length60-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC2037600.18123928122329827No Hit
CTTTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAA1861540.16557919688281245No Hit
ACTTTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAA1375980.12238988328309479No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)