FastQCFastQC Report
Sun 12 May 2024
EGAF00006473909

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006473909
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112425959
Total Bases8.4 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC2325480.2068454670686865No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2250060.20013705197747078No Hit
CTTTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAA2160080.19213356232078038No Hit
ACTTTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAA1468080.13058194148915378No Hit
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT1143160.10168114287555244No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)