FastQCFastQC Report
Wed 24 Aug 2022
EGAF00006598516

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006598516
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38844980
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTTTTACTTCCTCTAGATAGTCA574050.14777971310578614No Hit
CTGATGGCTCAAACACAGCGACCTCG549280.14140308477440328No Hit
GTCTCGTTCGTTATCGGAATTAACCA527750.13586054105318113No Hit
TTTCCTCTAGATAGTCAAGTTCGACC454640.11703957628501804No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)