FastQCFastQC Report
Wed 24 Aug 2022
EGAF00006598543

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006598543
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47963560
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA671810.14006675067488736No Hit
TGACTTTTACTTCCTCTAGATAGTCA627430.13081389288034498No Hit
ACCTTTAAGTTTCAGCTTTGCAACCA519040.10821548692382302No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT507610.10583242778475993No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)