FastQCFastQC Report
Sat 27 Aug 2022
EGAF00006598630

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006598630
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences374317948
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGTACAC11155817429.80305235056482No Hit
ATTGCGTG9245480724.699538852996707No Hit
CGACTTGA8553729122.851506708943596No Hit
TACAGACT8181157321.85617158811738No Hit
ATTGCGTA3918190.10467545093509649No Hit
CGACTTAA3814910.10191629924194817No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)