FastQCFastQC Report
Wed 24 Aug 2022
EGAF00006598637

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006598637
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37769483
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA606210.16050259411811382No Hit
TGACTTTTACTTCCTCTAGATAGTCA513670.13600133208071713No Hit
CCACCTACTAAGAACGGCCATGCACC408390.10812697647992692No Hit
CTGATGGCTCAAACACAGCGACCTCG393940.10430113644923336No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)