FastQCFastQC Report
Tue 23 Aug 2022
EGAF00006598648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006598648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23812421
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCGATG666857628.004611542858243No Hit
GCATCTCC635748826.698200909516927No Hit
AACGTCAA601061725.24151996136806No Hit
TGTAAGGT437911818.39005786097936No Hit
GCATCTCA699160.29361147276877053No Hit
CTGCGATA556270.23360497447949538No Hit
AACCTCAA409870.17212445555199954No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)