FastQCFastQC Report
Tue 13 Sep 2022
EGAF00006598885

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006598885
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94857612
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1232520.12993369472552185No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1050560.11075125947720463No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1022280.10776994892091527No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)