FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006609564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006609564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35735516
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATTTCCACGAGCACCAGCAGGGCCAGGGGCTCCAGGGCGACCTCTCT550570.1540680145768708No Hit
CTTCATTCCAGGGAGGCCAGCTGTTCCGGGCAATCCTCGAGCACCCTGAG459780.1286619171806558No Hit
CTCCATTTTCACCAGGGCTGCCAGGCTCACCCTTAGGACCAGCAGGACCA378550.10593102951136901No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)