FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006609591

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006609591
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1355238
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA270401.9952215035292695No Hit
ACCGCGGGACCGCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGTT104270.7693851559652253No Hit
ACGAGAAATTGAAAAGAAGGGGAAGGGGAAGAAAAGAAGGGGAAGAAGAT87600.6463809308770858No Hit
ACGGGGAAGAAAAGAAGGGGAAGAAGATCAAAGAAGGAAAGAAGAAGGGG70070.5170309569241712No Hit
ACGTCCGCCCCCCGTTCCCCCCTCCTCCTCGGCGCGCGGCGGCGGCGGCG67620.4989529514373121No Hit
ACCGCCGCGGGACCGCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGT67320.49673931811239064No Hit
ACGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCGC65330.4820555503904111No Hit
ACCTTGACGTGGGAGAAATTGAAAAGAAGGGGAAGGGGAAGAAAAGAAGG64950.4792516148455105No Hit
ACGGAAGGGGAAGAAAAGAAGGGGAAGAAGATCAAAGAAGGAAAGAAGAA62670.4624280015761069No Hit
ACCTTCTTTTCTTCCCCTTCTTCTTTCCTTCTTTGATCTTCTTCCCCTTC61290.45224528828146787No Hit
ACGGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCG61160.4512860471740019No Hit
ACCCCTTCTTTTCTTCCCCTTCTTCTTTCCTTCTTTGATCTTCTTCCCCT53790.3969044551584297No Hit
ACGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCGCC47120.3476880075676745No Hit
ACCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGTTTTCCTGGTGGCC46870.34584331313023986No Hit
ACGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCGCCG46790.3452530109102608No Hit
ACTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT45900.3386858987129936No Hit
ACGTGGGATCCCGCGGCCGTGTTTTCCTGGTGGCCCGGCCGTGCCTGAGG45120.3329304520681976No Hit
ACCGGAGAGAAAGAGAGAGGGAGCGTGAAAGGGAACGAGAAAGGCGAGAA44810.33064303096577874No Hit
ACCCGCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGTTTTCCTGG44720.3299789409683022No Hit
ACGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACCG44010.32474000876598796No Hit
ACCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGTTTTCCTGGTGGC42430.31308153992140125No Hit
ACCGTCCGCCCCCCGTTCCCCCCTCCTCCTCGGCGCGCGGCGGCGGCGGC41970.30968730215652157No Hit
ACGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGC39810.2937491422170866No Hit
ACGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACCGAAACC37390.2758925000627196No Hit
ACCCCGGCCCCGTCCGCCCCCCGTTCCCCCCTCCTCCTCGGCGCGCGGCG36270.26762826898301256No Hit
ACGGGAAGAAAAGAAGGGGAAGAAGATCAAAGAAGGAAAGAAGAAGGGGA36110.2664476645430544No Hit
ACGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACCGAAACCC36070.2661525134330649No Hit
ACGGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCG35830.26438160677312766No Hit
ACCGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACCGAAAC35580.2625369123356931No Hit
ACGGGAAGGGGAAGAAAAGAAGGGGAAGAAGATCAAAGAAGGAAAGAAGA34170.25213283570856193No Hit
ACGGGAGAAATTGAAAAGAAGGGGAAGGGGAAGAAAAGAAGGGGAAGAAG34170.25213283570856193No Hit
ACCCGCGGGACCGCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGT33800.2494026879411587No Hit
ACCCCCTTCTTTTCTTCCCCTTCTTCTTTCCTTCTTTGATCTTCTTCCCC33240.24527057240130518No Hit
ACGCGGGACCGCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGTTT31970.23589952465913736No Hit
ACCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTACGGAAGACCCGC31950.2357519491041426No Hit
ACGGGCCGTCCGGCGTCCCAGGCGGGGCGCCGCGGGACCGCCCTCGTGTC30980.22859453468689633No Hit
ACGCGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACCGAAA30610.22586438691949312No Hit
ACGGAAGAAAAGAAGGGGAAGAAGATCAAAGAAGGAAAGAAGAAGGGGAA30590.22571681136449837No Hit
ACCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGTTTTCCTGGTGG29270.21597682473484364No Hit
ACGCGAAAGAAAGAAGTGGTGGAGGAGGAGGAGAACGGGGCTGAGGAGGA28130.20756501810014183No Hit
ACGGCCGTCCGGCGTCCCAGGCGGGGCGCCGCGGGACCGCCCTCGTGTCT27000.1992269992429374No Hit
ACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA26280.19391427926312574No Hit
ACGGGGGCTCCTGGTGCCGAAGGTTCCCCTGGACGAGACGGTTCTCCTGG26080.19243852371317807No Hit
ACCGGTGGGATCCCGCGGCCGTGTTTTCCTGGTGGCCCGGCCGTGCCTGA25450.18778989373084284No Hit
ACAGCGAAAGAAAGAAGTGGTGGAGGAGGAGGAGAACGGGGCTGAGGAGG24870.18351020263599457No Hit
ACTGAAAAGAAGGGGAAGGGGAAGAAAAGAAGGGGAAGAAGATCAAAGAA24760.18269853708352332No Hit
ACAGCTGGGGCTGCTGGTCCTGCTGGTCCTGCTGGTCCTCGGGGAAGCCC24590.1814441448660678No Hit
ACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA24430.18026354042610965No Hit
ACGTCGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGACCGAAA24370.17982081376112535No Hit
ACCCTGGATTGGCTGGACCCCCTGGTGAATCTGGACGTGAGGGGGCTCCT24050.17745960488120904No Hit
ACGGAGAAATTGAAAAGAAGGGGAAGGGGAAGAAAAGAAGGGGAAGAAGA23730.17509839600129276No Hit
ACTTCTTTTCTTCCCCTTCTTCTTTCCTTCTTTGATCTTCTTCCCCTTCT23640.1744343060038163No Hit
ACCAAAGGTCCCCGTGGTGAGACTGGCCCTGCTGGACGTCCTGGTGAAGT23260.1716303704589157No Hit
ACGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC23210.17126143157142878No Hit
ACCGGGACCGCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGTTTT23030.16993325157647587No Hit
ACGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACCGAA22900.16897401046900987No Hit
ACGCCGCGGGACCGCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTG22730.16771961825155435No Hit
ACGGCGGGGCGCCGCGGGACCGCCCTCGTGTCTGTGGCGGTGGGATCCCG22720.16764583047405696No Hit
ACGGGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCC22360.1649894704841511No Hit
ACCCGAGGGCCGTCCGGCGTCCCAGGCGGGGCGCCGCGGGACCGCCCTCG22000.1623331104942453No Hit
ACGCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGTTTTCCTGGTG21570.15916023606185775No Hit
ACCCGCGACCGGCTCCGGGACGGCTGGGAAGGCCCGGCGGGGAAGGTGGC21400.15790584384440223No Hit
ACCCTTCTTTTCTTCCCCTTCTTCTTTCCTTCTTTGATCTTCTTCCCCTT21380.15775826828940748No Hit
ACCCGGCGTCCCAGGCGGGGCGCCGCGGGACCGCCCTCGTGTCTGTGGCG21210.15650387607195193No Hit
ACCCCCTTCTTCTTTCCTTCTTTGATCTTCTTCCCCTTCTTTTCTTCCCC20180.14890373498972134No Hit
ACCCTGGTGCCGAAGGTTCCCCTGGACGAGACGGTTCTCCTGGCGCCAAG20140.14860858387973183No Hit
ACCCCCGGCCCCGTCCGCCCCCCGTTCCCCCCTCCTCCTCGGCGCGCGGC19970.1473541916622763No Hit
ACCCCCGTTCCCCCCTCCTCCTCGGCGCGCGGCGGCGGCGGCGGCGGCGG19940.14713282832978414No Hit
ACTGCGCCGCGACCGGCTCCGGGACGGCTGGGAAGGCCCGGCGGGGAAGG19860.1465425261098051No Hit
ACCGGGGCTCGCGAGGCGGTTCTCGGTGGGGGCCGAGGGCCGTCCGGCGT19470.1436648027874071No Hit
ACGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACC19050.14056571613251695No Hit
ACATTGAAAAGAAGGGGAAGGGGAAGAAAAGAAGGGGAAGAAGATCAAAG19040.14049192835501956No Hit
ACCTGGTGCCGAAGGTTCCCCTGGACGAGACGGTTCTCCTGGCGCCAAGG18990.14012298946753263No Hit
ACCGCGGGTCGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGAC18850.13908996058256928No Hit
ACCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACCGA18400.135769510595187No Hit
ACGGCGTCCCAGGCGGGGCGCCGCGGGACCGCCCTCGTGTCTGTGGCGGT18320.1351792083752079No Hit
ACAGAAATTGAAAAGAAGGGGAAGGGGAAGAAAAGAAGGGGAAGAAGATC17630.1300878517278884No Hit
ACCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACCGAAACCCC17610.1299402761728936No Hit
ACGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCC17080.12602952396553224No Hit
ACGGTGGGATCCCGCGGCCGTGTTTTCCTGGTGGCCCGGCCGTGCCTGAG16930.12492270730307148No Hit
ACCTCGGGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCACCGCC16380.12086437954071537No Hit
ACGGAAGAAGGTGGGGAGGAAGAGGAGGAGGAAGAAGAAGGTGATGGTGA15440.11392832845596125No Hit
ACGCCGAGGGCCGTCCGGCGTCCCAGGCGGGGCGCCGCGGGACCGCCCTC15410.11370696512346909No Hit
ACGACCGCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGTTTTCCT15240.11245257290601356No Hit
ACGTTGGCTTTTCTCTTGACGTGGGAGAAATTGAAAAGAAGGGGAAGGGG15160.11186227068603449No Hit
ACCGAGGGCCGTCCGGCGTCCCAGGCGGGGCGCCGCGGGACCGCCCTCGT15060.11112439291106065No Hit
ACGCCCTTTCTTTTTCTCTTTCTTCCTCTTCCCTTCGTCTTTTCCTTTCT14940.11023893958109203No Hit
ACCCGTCCGCCCCCCGTTCCCCCCTCCTCCTCGGCGCGCGGCGGCGGCGG14900.10994378847110249No Hit
ACGGGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC14790.10913212291863127No Hit
ACTGAAGATGAAGAAGAGGATGATGAGGACGAGGATGACGACGACGACGA14710.1085418206986522No Hit
ACGTCCGGCGTCCCAGGCGGGGCGCCGCGGGACCGCCCTCGTGTCTGTGG14620.10787773070117573No Hit
ACGGGGGGTTTCGGTCCCGCCGCCGCCGCCGCCGCCACCGCCGCCGCCGC14570.1075087918136888No Hit
ACGAGAAAAAGAACGGGAGAGAGAAAGGGAAGAAAGAGAAAGGAAAAGAC14510.10706606514870451No Hit
ACCGGGTCGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGACCG14450.1066233384837202No Hit
ACGTGGGAGAAATTGAAAAGAAGGGGAAGGGGAAGAAAAGAAGGGGAAGA14430.10647576292872545No Hit
ACCGCCCTCGTGTCTGTGGCGGTGGGATCCCGCGGCCGTGTTTTCCTGGT14300.10551652182125944No Hit
ACCCCTTCTTCTTTCCTTCTTTGATCTTCTTCCCCTTCTTTTCTTCCCCT13900.10256501072136406No Hit
ACCGGGGCGCCGCGGGACCGCCCTCGTGTCTGTGGCGGTGGGATCCCGCG13860.10226985961137454No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)