FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006609733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006609733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33374210
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGA4620811.3845451323042552No Hit
TACCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAG1472240.44113104100441625No Hit
TACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACG1014080.3038513870440679No Hit
TACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC810570.24287316463820416No Hit
TACATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCA761310.22811326470349413No Hit
TACAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGAC629650.18866364177609No Hit
TAAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCAAG622600.1865512322239238No Hit
TAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGACTC595140.17832332211009638No Hit
TACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGACTCC579760.17371497332820762No Hit
TACTTCAAGCTCCTAAGCCACTGCCTGCTGGTGACCCTGGCCGCCCACCT572870.171650504985736No Hit
TAGTCAACTTCAAGCTCCTAAGCCACTGCCTGCTGGTGACCCTGGCCGCC509180.15256690720169855No Hit
TATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACC503110.1507481375589115No Hit
TACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCAAGGCCGCC478070.14324533824171418No Hit
TACACAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTG427240.12801501518687633No Hit
TACCAAGACCTACTTCCCGCACTTCGACCTGAGCCACGGCTCTGCCCAGG415900.124617181949775No Hit
TACTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCT400550.12001782214470394No Hit
TAGGTCAACTTCAAGCTCCTAAGCCACTGCCTGCTGGTGACCCTGGCCGC397100.11898408981066518No Hit
TACCGGTCAACTTCAAGCTCCTAAGCCACTGCCTGCTGGTGACCCTGGCC384300.11514879303510105No Hit
TACGGTCAACTTCAAGCTCCTAAGCCACTGCCTGCTGGTGACCCTGGCCG355700.10657930180219997No Hit
TAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCAA345710.1035859725218964No Hit
TAATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCAC340650.10206983176530621No Hit
TAACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGAC339940.10185709264728664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)