FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006609761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006609761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57327411
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGA4766900.8315219398273541No Hit
CACTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCT1731270.30199689289997766No Hit
CACCTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGC849840.14824321998424106No Hit
CACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACG818200.14272404522157822No Hit
CACCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAG778800.13585124226175152No Hit
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC748330.13053615834840335No Hit
CACACCCGGGAGGTCACTCTCCCCGGGCTCTGTCCAAGTGGCGTAGGGGA704010.12280512720171508No Hit
CACTTCAAGCTCCTAAGCCACTGCCTGCTGGTGACCCTGGCCGCCCACCT639330.1115225664037052No Hit
CACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCC610870.10655810010328218No Hit
CACATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCA592340.1033257894726835No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)