FastQCFastQC Report
Wed 10 Aug 2022
EGAF00006620073

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006620073
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132924429
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAAACAGCTCCAACAGGATCAGGAGGGTAATAGACTTACTGTCATGGGA5931600.4462385164731458No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1733970.1304478050456775No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATGC1422870.10704352922215675TruSeq Adapter, Index 7 (100% over 50bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)