FastQCFastQC Report
Wed 10 Aug 2022
EGAF00006620074

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006620074
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132924429
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGCTCACCTCCAGCTTTAGTTTTCCCATGACAGTAAGTCTATTACCCTC6402300.4816496146092153No Hit
ATGTGCTTAGTTCACATCTTCATAGTGCGCCTTTGTGTTTTCCTGGGTAT2109970.15873455435343642No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1748250.1315220996736424No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)