FastQCFastQC Report
Tue 9 Aug 2022
EGAF00006620124

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006620124
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63203255
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCC1589860.2515471711069311No Hit
AGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGC1135010.17958094088666796No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)