FastQCFastQC Report
Tue 9 Aug 2022
EGAF00006620146

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006620146
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53653955
Sequences flagged as poor quality0
Sequence length125
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCC1453310.2708672641187402No Hit
AGCACATCAAAAGTTCCCAAAGAGGGCTTGCTCTCTCTTCACCTGCTCTG943150.17578387278253765No Hit
AGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGC795070.14818478898713058No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)