FastQCFastQC Report
Tue 9 Aug 2022
EGAF00006620242

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006620242
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58441426
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATGGTCCTCTTCCCTCGCCCGTCATGTGCAGGGTCAAAGGCAGGTGAGC1294910.22157399102479122No Hit
CATGGTCCTCTTCCCTCGCCCGTCACGTGCAGGGTCAAAGGCAGGTGAGC1098310.18793347034345123No Hit
GGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCC847740.1450580620671371No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)