FastQCFastQC Report
Wed 14 Sep 2022
EGAF00006623090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16482
Sequences flagged as poor quality0
Sequence length510-3060
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTACCTTGTTACGACTTCACCCCAGTCATCGACCCCACCGTGGTGATC243314.761558063341829No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC13147.972333454677831No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATCGACCCCACCGTGGTGATC4852.9426040529062005No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA4472.712049508554787No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC3602.184200946487077No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG3332.020385875500546No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG3031.8383691299599565No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCGACCCCACCGTGGTGATC2611.5835456862031305No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC2511.5228734376896007No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG2281.383327266108482No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG2151.304453343040893No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG2111.2801844436354812No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG2031.2316466448246572No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG1871.1345710472030095No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT1580.9586215265137726No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG1570.9525543016624196No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC1550.9404198519597137No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1500.9100837277029487No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1470.8918820531488897No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1430.8676131537434777No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG1330.8069409052299479No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1300.7887392306758889No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1280.7766047809731829No Hit
AGAGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG1280.7766047809731829No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1260.7644703312704768No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1250.7584031064191239No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC1130.685596408202888No Hit
AGAGTTCGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG1120.679529183351535No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1110.673461958500182No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1090.661327508797476No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG1030.6249241596893581No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA1020.6188569348380051No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG970.5885208105812402No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG960.5824535857298871No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA950.5763863608785341No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG950.5763863608785341No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG950.5763863608785341No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA940.5703191360271811No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG820.4975124378109453No Hit
AGAGTTCGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG740.44897463900012136No Hit
GGCTACCTTGTTACGACTTCACTCCAATCATCAGCTCCGCCTTCGACGGC730.44290741414876833No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG730.44290741414876833No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG720.4368401892974154No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG690.41863851474335634No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG660.4004368401892974No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG650.39436961533794446No Hit
AGAGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG650.39436961533794446No Hit
GGCTACCTTGTTACGACTTCACCCCAGTTATCCGCCCCGCCTTCGGCAGC630.3822351656352384No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG630.3822351656352384No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC610.37010071593253246No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC600.3640334910811795No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG590.35796626622982647No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG560.3397645916757675No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG550.3336973668244145No Hit
GGTACCTTGTTACGACTTCACCCCAGTCATCGACCCCACCGTGGTGATCG550.3336973668244145No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG540.32763014197306156No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG530.32156291712170854No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC530.32156291712170854No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG530.32156291712170854No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG520.31549569227035557No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG520.31549569227035557No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG520.31549569227035557No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG500.30336124256764957No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA490.29729401771629654No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG450.2730251183108846No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG420.25482344375682564No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG420.25482344375682564No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT380.23055454435141365No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG380.23055454435141365No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG370.22448731950006068No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG370.22448731950006068No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC340.2062856449460017No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG330.2002184200946487No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG330.2002184200946487No Hit
GGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT320.19415119524329572No Hit
GGCTACCTTGTTACGACTTCACCCCAGTTATCGACGCCACCTTCGACGAC300.18201674554058975No Hit
TGGCTACCTTGTTACGACTTCACCCCAGTCATCGACCCCACCGTGGTGAT300.18201674554058975No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC300.18201674554058975No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC290.17594952068923675No Hit
GGCTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC280.16988229583788375No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC280.16988229583788375No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG280.16988229583788375No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA270.16381507098653078No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG260.15774784613517778No Hit
GGCTACCTTGTTACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGT260.15774784613517778No Hit
GGCTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC260.15774784613517778No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA260.15774784613517778No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG250.15168062128382478No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGTCGC250.15168062128382478No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG240.1456133964324718No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG240.1456133964324718No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT240.1456133964324718No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG240.1456133964324718No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG230.13954617158111882No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC230.13954617158111882No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG230.13954617158111882No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG220.13347894672976582No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCACCTTCCCCACCTTAGACGGC210.12741172187841282No Hit
AGGGTTTGATTCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACAT210.12741172187841282No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC210.12741172187841282No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATTAGCTCTGCCTTCGACTGC210.12741172187841282No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA200.12134449702705982No Hit
AGGGTTTGATTCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACAT200.12134449702705982No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG190.11527727217570682No Hit
AGGGTTCGATTCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACAT190.11527727217570682No Hit
GGCTACCTTGTTACGACTTCGTCCCAATCGCTAGCCCCACCTTTAACCGC180.10921004732435385No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC180.10921004732435385No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCACCAGACCTGCCTTCGGCAGC180.10921004732435385No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)