FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623091

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623091
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9754
Sequences flagged as poor quality0
Sequence length512-3567
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC3743.8343243797416444No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC2312.3682591757227804No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA2242.2964937461554236No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC1781.824892351855649No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1741.7838835349600166No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC1671.7121181053926595No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1251.2815255279885176No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC1171.1995078941972523No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1111.1379946688538036No Hit
AGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA1001.025220422390814No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG991.0149682181669057No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC981.0047160139429978No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC981.0047160139429978No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG930.953454992823457No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG820.8406807463604674No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG750.7689153167931105No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC730.7484109083452942No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG690.7074020914496617No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG690.7074020914496617No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC690.7074020914496617No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG630.6458888661062128No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC600.6151322534344884No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA560.5741234365388559No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG540.5536190280910396No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG490.5023580069714989No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA480.49210580274759075No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC480.49210580274759075No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGC460.4716013942997745No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG450.4613491900758663No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG430.44084478162805No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG430.44084478162805No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG410.4203403731802337No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC410.4203403731802337No Hit
GGGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG410.4203403731802337No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG390.3998359647324175No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG380.38958376050850935No Hit
GGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAA380.38958376050850935No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG360.36907935206069303No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGG340.3485749436128768No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC330.3383227393889686No Hit
GAGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG330.3383227393889686No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG320.3280705351650605No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG290.29731392249333605No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG290.29731392249333605No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG280.28706171826942795No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG280.28706171826942795No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG280.28706171826942795No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG280.28706171826942795No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG270.2768095140455198No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG270.2768095140455198No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG270.2768095140455198No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG270.2768095140455198No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG260.26655730982161163No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC260.26655730982161163No Hit
GAGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGC250.2563051055977035No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG250.2563051055977035No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG250.2563051055977035No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA240.24605290137379537No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC240.24605290137379537No Hit
GGCTACCTTGTTACGACTTCACCCCAGTTATCGACGCCACCTTCGACGAC230.23580069714988725No Hit
GGGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG230.23580069714988725No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG230.23580069714988725No Hit
GGCTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC230.23580069714988725No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG230.23580069714988725No Hit
GAGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT230.23580069714988725No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG220.2255484929259791No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG220.2255484929259791No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGG220.2255484929259791No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG210.21529628870207096No Hit
GAGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG210.21529628870207096No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG210.21529628870207096No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATTTGTTTTGCCTTGGGCAGC210.21529628870207096No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGTCGC210.21529628870207096No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG200.2050440844781628No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC200.2050440844781628No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG200.2050440844781628No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG200.2050440844781628No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG190.19479188025425467No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG190.19479188025425467No Hit
GAGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT190.19479188025425467No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG190.19479188025425467No Hit
GAGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT190.19479188025425467No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC180.18453967603034652No Hit
GGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCTACCTTAGACGGC180.18453967603034652No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATCTGCCCTGCCTTAGACGGC180.18453967603034652No Hit
GAGCTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGG180.18453967603034652No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG180.18453967603034652No Hit
GGGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGC170.1742874718064384No Hit
AGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA170.1742874718064384No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTGCCCTAGGCCGT170.1742874718064384No Hit
CGGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCG170.1742874718064384No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG170.1742874718064384No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG160.16403526758253026No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG160.16403526758253026No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG160.16403526758253026No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG160.16403526758253026No Hit
GCGGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGC160.16403526758253026No Hit
GAGGGTTCGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACAT160.16403526758253026No Hit
AGAGTTCGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG160.16403526758253026No Hit
AGCTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC150.1537830633586221No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG140.14353085913471397No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA140.14353085913471397No Hit
AGAGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG140.14353085913471397No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG140.14353085913471397No Hit
AGAGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG130.13327865491080582No Hit
GGTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGCT130.13327865491080582No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG130.13327865491080582No Hit
CGGGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAA130.13327865491080582No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG130.13327865491080582No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG130.13327865491080582No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC130.13327865491080582No Hit
GAGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT130.13327865491080582No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG120.12302645068689769No Hit
GAGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT120.12302645068689769No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG120.12302645068689769No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACTGGTTTTACCCTAGGTAGC120.12302645068689769No Hit
GAGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT120.12302645068689769No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTCACCCTAGGCCGA120.12302645068689769No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC120.12302645068689769No Hit
GGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC120.12302645068689769No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG120.12302645068689769No Hit
GGCTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC120.12302645068689769No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG120.12302645068689769No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC120.12302645068689769No Hit
AGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC120.12302645068689769No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG110.11277424646298954No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG110.11277424646298954No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC110.11277424646298954No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG110.11277424646298954No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC110.11277424646298954No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG110.11277424646298954No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG110.11277424646298954No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG110.11277424646298954No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG110.11277424646298954No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG110.11277424646298954No Hit
AGAGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG110.11277424646298954No Hit
AGCTACCTTGTTACGACTTCACCCCAGTTATCGACGCCACCTTCGACGAC110.11277424646298954No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTCGCTCTAGGCCGA110.11277424646298954No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATCTGCCCTGCCTTAGACGGC110.11277424646298954No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA110.11277424646298954No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATTGATTTCGCCTTAGGTAAT100.1025220422390814No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCACCAGTCCTACCTTAGGCAGT100.1025220422390814No Hit
GGGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG100.1025220422390814No Hit
CGGGCTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCG100.1025220422390814No Hit
GAGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACAT100.1025220422390814No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG100.1025220422390814No Hit
CGAGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCG100.1025220422390814No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCACCAGACCTGCCTTCGGCAGC100.1025220422390814No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG100.1025220422390814No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG100.1025220422390814No Hit
GAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT100.1025220422390814No Hit
GGGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG100.1025220422390814No Hit
GCGGGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTA100.1025220422390814No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG100.1025220422390814No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG100.1025220422390814No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACCAT100.1025220422390814No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)