FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623102

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623102
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15385
Sequences flagged as poor quality0
Sequence length503-5348
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC6704.354891127721807No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC5173.36041598960026No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA2751.7874553136171596No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC2651.7224569385765356No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC2601.6899577510562238No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA2051.3324666883327916No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1921.2479688007799805No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC1891.2284692882677932No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1851.2024699382515438No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1621.0529736756581085No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC1450.9424764380890478No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1440.9359766005849854No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC1400.9099772505687357No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1290.8384790380240493No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1280.831979200519987No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1280.831979200519987No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA1270.8254793630159246No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1260.8189795255118623No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1210.7864803379915501No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1180.766980825479363No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC1100.7149821254468639No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA1060.6889827754306143No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1040.6759831004224894No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1030.669483262918427No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1020.6629834254143646No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1020.6629834254143646No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1010.6564835879103023No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG900.5849853753656159No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG900.5849853753656159No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG860.5589860253493663No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG850.5524861878453038No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG830.5394865128371791No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG820.5329866753331166No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG790.5134871628209294No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG790.5134871628209294No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG790.5134871628209294No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC770.5004874878128047No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG770.5004874878128047No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG740.48098797530061754No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC740.48098797530061754No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG700.45498862528436784No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG680.44198895027624313No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA660.4289892752681183No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC660.4289892752681183No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG650.42248943776405595No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC650.42248943776405595No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC650.42248943776405595No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG640.4159896002599935No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA630.40948976275593113No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG610.39649008774780625No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG600.3899902502437439No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG590.3834904127396815No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG580.37699057523561913No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC560.3639909002274943No Hit
GGCTACCTTGTTACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGT540.35099122521936954No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA540.35099122521936954No Hit
GGTTACCTTGTTACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGT520.3379915502112447No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC520.3379915502112447No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT510.3314917127071823No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG480.31199220019499513No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG470.3054923626909327No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA470.3054923626909327No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG470.3054923626909327No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG460.29899252518687036No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG450.29249268768280795No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG440.28599285017874554No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG440.28599285017874554No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG420.2729931751706207No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG420.2729931751706207No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA420.2729931751706207No Hit
GGCTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC410.2664933376665583No Hit
GGCTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC400.25999350016249595No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC390.25349366265843354No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG390.25349366265843354No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG370.24049398765030877No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG370.24049398765030877No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA370.24049398765030877No Hit
GGGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG360.23399415014624636No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG340.22099447513812157No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG320.20799480012999674No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG320.20799480012999674No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG320.20799480012999674No Hit
GGGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG310.20149496262593436No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT310.20149496262593436No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA310.20149496262593436No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG310.20149496262593436No Hit
GGTTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC300.19499512512187195No Hit
AGGGTTTGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGG300.19499512512187195No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG290.18849528761780956No Hit
AGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGG290.18849528761780956No Hit
GGCTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC280.18199545011374715No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG280.18199545011374715No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG280.18199545011374715No Hit
GAGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG280.18199545011374715No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG280.18199545011374715No Hit
GGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA270.17549561260968477No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC270.17549561260968477No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC270.17549561260968477No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC270.17549561260968477No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGG270.17549561260968477No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG270.17549561260968477No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG260.16899577510562236No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA260.16899577510562236No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG260.16899577510562236No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG260.16899577510562236No Hit
GGTTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC260.16899577510562236No Hit
AGCTACCTTGTTACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGT250.16249593760155995No Hit
GGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC250.16249593760155995No Hit
GAGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG240.15599610009749756No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC230.14949626259343518No Hit
GGGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG230.14949626259343518No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG220.14299642508937277No Hit
GGCTACCTTGTTACGACTTCGTCCCAATCGCTAGCCCCACCTTTAACCGC210.13649658758531036No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG210.13649658758531036No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG200.12999675008124797No Hit
AGCTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA200.12999675008124797No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT190.12349691257718556No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC190.12349691257718556No Hit
AGAGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACA190.12349691257718556No Hit
GGCTACCTTGTTACGACTTAGTCCCAATCGCCAGTCCCACCTTCGACGGC190.12349691257718556No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG190.12349691257718556No Hit
GAGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT190.12349691257718556No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTCACCCTAGGCCGA180.11699707507312318No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG170.11049723756906078No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC170.11049723756906078No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC170.11049723756906078No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG170.11049723756906078No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC160.10399740006499837No Hit
GAGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT160.10399740006499837No Hit
GAGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT160.10399740006499837No Hit
GGTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGCT160.10399740006499837No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG160.10399740006499837No Hit
GGGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGG160.10399740006499837No Hit
AGTTACCTTGTTACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGT160.10399740006499837No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC160.10399740006499837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)