FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623110

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623110
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10811
Sequences flagged as poor quality0
Sequence length505-4156
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC3993.690685413005272No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA2792.580704837665341No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC2572.3772083988530204No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC2552.3587087225973544No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC2372.192211636296365No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG2292.118212931273703No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG2272.0997132550180373No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA1861.720469891776894No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1811.6742207011377301No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG1671.5447229673480714No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC1551.433724909814078No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG1501.3874757191749143No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1421.3134770141522523No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1211.1192304134677642No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1181.091480899084266No Hit
AGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA1181.091480899084266No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG1111.0267320321894366No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA1101.017482194061604No Hit
AGGGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG1091.0082323559337711No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC1060.9804828415502729No Hit
AGAGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG1030.9527333271667746No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG1020.9434834890389419No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA980.9064841365276107No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG970.8972342983997781No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG940.8694847840162797No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG900.8324854315049486No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG750.6937378595874572No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA690.6382388308204606No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG690.6382388308204606No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG650.6012394783091296No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG630.5827398020534641No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC610.5642401257977986No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGTCGC600.5549902876699658No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA600.5549902876699658No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG590.545740449542133No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTGCCCTAGGCCGA560.5179909351586348No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG560.5179909351586348No Hit
AGGGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG520.48099158264730363No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG500.4624919063916382No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG490.45324206826380536No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC480.4439922301359726No Hit
AGAGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG480.4439922301359726No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC450.4162427157524743No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG450.4162427157524743No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC440.4069928776246416No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG410.37924336324114327No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC410.37924336324114327No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG390.36074368698547776No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC370.34224401072981225No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA360.33299417260197944No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG330.3052446582184812No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG330.3052446582184812No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTCACCCTAGGCCGA330.3052446582184812No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG320.2959948200906484No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG320.2959948200906484No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC310.2867449819628156No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG290.2682453057071501No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC280.2589954675793174No Hit
GGTTACCTTGTTACGACTTCACCCTCCTTACCAAGCGTACCTTCGGCACC270.2497456294514846No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG270.2497456294514846No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC260.24049579132365181No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC250.2312459531958191No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTCACCCTAGGCCGA250.2312459531958191No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTCACCCTAGGCCGA250.2312459531958191No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG250.2312459531958191No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTTTTACCCTAGGCAGC240.2219961150679863No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC240.2219961150679863No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA240.2219961150679863No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC240.2219961150679863No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCGGCAGGCCTAACACATG240.2219961150679863No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTACCCTAGGCCGA230.21274627694015358No Hit
AGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC230.21274627694015358No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGTCGC230.21274627694015358No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATTCACACCTTCATTACC220.2034964388123208No Hit
TGGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG220.2034964388123208No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC210.194246600684488No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTTGTTTTGCCTTGGGCAGC210.194246600684488No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACCAT210.194246600684488No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC210.194246600684488No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG210.194246600684488No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC210.194246600684488No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG200.18499676255665526No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTAGTTTTACCCTAAACAGC200.18499676255665526No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTGCCCTAGGCCGA200.18499676255665526No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG200.18499676255665526No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC190.17574692442882248No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG190.17574692442882248No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG190.17574692442882248No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA190.17574692442882248No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG190.17574692442882248No Hit
TGGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG180.16649708630098972No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA180.16649708630098972No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG180.16649708630098972No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG180.16649708630098972No Hit
AGGGTTTGATTATGGCTCAGAACGAACGCTGGCGGCGCGTCTTAAGCATG180.16649708630098972No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG180.16649708630098972No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC170.15724724817315697No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG170.15724724817315697No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG170.15724724817315697No Hit
TAGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT170.15724724817315697No Hit
AGAGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG170.15724724817315697No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG160.1479974100453242No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCACCAGACCTGCCTTCGGCAGC160.1479974100453242No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG150.13874757191749146No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC150.13874757191749146No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTAGTTTTACCCTAAACAGC150.13874757191749146No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG150.13874757191749146No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG150.13874757191749146No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG150.13874757191749146No Hit
AGGGTTTGATTATGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG150.13874757191749146No Hit
GGTTACCTTGTTACGACTTCACCCCCCTCACGAAGCATACCTTCGACAGC140.1294977337896587No Hit
TGGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGG140.1294977337896587No Hit
AGAGTTTGATTATGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG140.1294977337896587No Hit
AGAGTTTGATTATGGCTCAGAACGAACGCTGGCGGCGCGTCTTAAGCATG140.1294977337896587No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCCGCCCTGCCTTCGGCAGC140.1294977337896587No Hit
TAGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT140.1294977337896587No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG140.1294977337896587No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCGGCAGGCCTAACACATG140.1294977337896587No Hit
TAGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG140.1294977337896587No Hit
AGAGTTCGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG140.1294977337896587No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG140.1294977337896587No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA140.1294977337896587No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA130.12024789566182591No Hit
TGGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGG130.12024789566182591No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT130.12024789566182591No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG130.12024789566182591No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTTTTACCCTAGGCAGC130.12024789566182591No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG130.12024789566182591No Hit
AGGGTTTGATCATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG130.12024789566182591No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCACGAACCCTGCCGTGGTAATC120.11099805753399315No Hit
AGAGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCGCGTCTTAAGCATG120.11099805753399315No Hit
GGTTACCTTGTTACGACTTCACCCTCCTTACCAAACGTACCTTCGGCACC120.11099805753399315No Hit
TGGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGC120.11099805753399315No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG120.11099805753399315No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC120.11099805753399315No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCACCTTCCCCACCTTAGACGGC120.11099805753399315No Hit
AGTTACCTTGTTACGACTTCACCCTCCTTACCAAGCGTACCTTCGGCACC120.11099805753399315No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG120.11099805753399315No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGCC120.11099805753399315No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGAC120.11099805753399315No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGTCGC120.11099805753399315No Hit
AGGGTTTGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGG120.11099805753399315No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCAGTTTTACCCTAGGCCGA110.1017482194061604No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG110.1017482194061604No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT110.1017482194061604No Hit
ACTGGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTA110.1017482194061604No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACCAT110.1017482194061604No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG110.1017482194061604No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCACCAGACCTGCCTTCGGCAGC110.1017482194061604No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)