FastQCFastQC Report
Fri 2 Sep 2022
EGAF00006623120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17936
Sequences flagged as poor quality0
Sequence length502-5037
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC9395.235280999107939No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG5182.8880463871543265No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA5172.882471008028546No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC5122.8545941123996434No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG4492.503345227475468No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG4282.386262265834077No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA3972.2134255129348794No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG3952.2022747546833186No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA3091.7227921498661911No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA2621.4607493309545048No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG2461.371543264942016No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG2321.2934879571810882No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATTCACACCTTAGATACC2311.2879125780553078No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA2191.221008028545941No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG2091.1652542372881356No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG2011.1206512042818912No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG2011.1206512042818912No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG1891.0537466547725245No Hit
AGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA1730.9645405887600357No Hit
GGTTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC1400.7805530776092774No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC1310.7303746654772524No Hit
AGTTACCTTGTTACGACTTCACCCCAATCACTATTCACACCTTAGATACC1250.6969223907225691No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG1190.6634701159678859No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA1180.6578947368421052No Hit
AGAGTTTGATTATGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG1170.6523193577163247No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1170.6523193577163247No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT1140.6355932203389831No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG1120.6244424620874219No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG1090.6077163247100803No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG1080.6021409455842998No Hit
AGGGTTTGATTATGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG1000.5575379125780553No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG980.5463871543264942No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG980.5463871543264942No Hit
AGTTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC850.473907225691347No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG690.38470115967885815No Hit
GGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC660.3679750223015165No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA650.3623996431757359No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC630.35124888492417483No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATTAGCTCTGCCTTCGACTGC620.3456735057983943No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT610.34009812667261374No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA610.34009812667261374No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC610.34009812667261374No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC600.3345227475468332No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG600.3345227475468332No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG600.3345227475468332No Hit
GGTTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC600.3345227475468332No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG590.3289473684210526No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT590.3289473684210526No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC580.32337198929527206No Hit
TGGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG580.32337198929527206No Hit
AGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT570.31779661016949157No Hit
AGAGTTTGATTCTGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG560.31222123104371097No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG560.31222123104371097No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG530.29549509366636934No Hit
GGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA510.2843443354148082No Hit
GGTTACCTTGTTACGACTTCACCCCAATTACTATTCACACCTTAGATACC510.2843443354148082No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG500.27876895628902765No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG490.2731935771632471No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC490.2731935771632471No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG490.2731935771632471No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG460.25646743978590547No Hit
TAGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG460.25646743978590547No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG440.24531668153434436No Hit
AGGGTTTGATTCTGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG440.24531668153434436No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATTGATTCTACCTTCGACTGC440.24531668153434436No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG430.23974130240856378No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA430.23974130240856378No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATCTCCCCCACCTTAGGCCGC430.23974130240856378No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG420.23416592328278324No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT410.22859054415700267No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC400.22301516503122212No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC390.21743978590544155No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC390.21743978590544155No Hit
AGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC390.21743978590544155No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC380.211864406779661No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG380.211864406779661No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATTAGCTCTGCCTTCGACTGC370.2062890276538805No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG360.20071364852809992No Hit
TAGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT360.20071364852809992No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA350.19513826940231935No Hit
AGAGTTTGATTATGGCTCAGGATAAACGCTGGCGGCGCACATAAGACATG340.1895628902765388No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG330.18398751115075826No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT330.18398751115075826No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG330.18398751115075826No Hit
TAGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT330.18398751115075826No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA320.17841213202497772No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG320.17841213202497772No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTACCCTAGGCCGA320.17841213202497772No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG310.17283675289919714No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTACCCTAGGCCGT310.17283675289919714No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC310.17283675289919714No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG310.17283675289919714No Hit
TGGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG300.1672613737734166No Hit
GGTTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC300.1672613737734166No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC300.1672613737734166No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC300.1672613737734166No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG290.16168599464763603No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG290.16168599464763603No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG290.16168599464763603No Hit
TAGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT280.15611061552185548No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC280.15611061552185548No Hit
TAGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG270.15053523639607494No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC270.15053523639607494No Hit
TGGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCG270.15053523639607494No Hit
AGTTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC270.15053523639607494No Hit
TGGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCG270.15053523639607494No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCGCCCCGCCTTCGGCAGC260.14495985727029437No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG260.14495985727029437No Hit
TAGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT260.14495985727029437No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG250.13938447814451382No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCACCTTCCCCACCTTAGACGGC250.13938447814451382No Hit
AGTTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC250.13938447814451382No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG250.13938447814451382No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG250.13938447814451382No Hit
AGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC250.13938447814451382No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC250.13938447814451382No Hit
TAGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCG250.13938447814451382No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG240.13380909901873325No Hit
AGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA240.13380909901873325No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC230.12823371989295274No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG230.12823371989295274No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCAGTCCTGCCTTCGGCAGC230.12823371989295274No Hit
GGTTACCTTGTTACGACTTCGTCCCAATCGCTAGCCCCACCTTTAACCGC230.12823371989295274No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATG220.12265834076717218No Hit
TAGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT210.11708296164139162No Hit
AGGGTTTGATTATGGCTCAGGATAAACGCTGGCGGCGCACATAAGACATG210.11708296164139162No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG210.11708296164139162No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG210.11708296164139162No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG210.11708296164139162No Hit
GGCTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC200.11150758251561106No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG200.11150758251561106No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC200.11150758251561106No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC190.1059322033898305No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG190.1059322033898305No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG190.1059322033898305No Hit
AGAGTTTGATTATGGCTCAGGATAAACGCTGGCGGTGTACATAAGACATG180.10035682426404996No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTTGTTTTGCCTTGGGCAGC180.10035682426404996No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC180.10035682426404996No Hit
AGTTACCTTGTTACGACTTCGTCCCAATCGCTAGCCCCACCTTTAACCGC180.10035682426404996No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATG180.10035682426404996No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG180.10035682426404996No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG180.10035682426404996No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC180.10035682426404996No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG180.10035682426404996No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)