FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623121

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623121
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11160
Sequences flagged as poor quality0
Sequence length514-4461
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC4714.220430107526882No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC3312.9659498207885306No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC2432.1774193548387095No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC2151.9265232974910396No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1941.7383512544802866No Hit
GGCTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC1761.5770609318996418No Hit
GGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC1321.1827956989247312No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1301.1648745519713262No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1100.985663082437276No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1050.9408602150537635No Hit
AGCTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC960.8602150537634409No Hit
AGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC890.7974910394265233No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG800.7168458781362007No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG740.6630824372759856No Hit
GGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA720.6451612903225806No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG690.6182795698924731No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG670.6003584229390682No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG660.5913978494623656No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG650.5824372759856631No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG640.5734767025089605No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG580.5197132616487455No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG560.5017921146953405No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA540.4838709677419355No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA540.4838709677419355No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG530.47491039426523296No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG530.47491039426523296No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA520.46594982078853053No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG500.4480286738351254No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG500.4480286738351254No Hit
GTGGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCG490.439068100358423No Hit
GGTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGCT490.439068100358423No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG480.43010752688172044No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG470.4211469534050179No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA460.4121863799283154No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG450.4032258064516129No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG440.39426523297491045No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG430.3853046594982079No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG430.3853046594982079No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG420.3763440860215054No Hit
TGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG420.3763440860215054No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG410.36738351254480284No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG410.36738351254480284No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC400.35842293906810035No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA400.35842293906810035No Hit
AGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA390.34946236559139787No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG380.34050179211469533No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG380.34050179211469533No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG380.34050179211469533No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG380.34050179211469533No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG370.3315412186379928No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA360.3225806451612903No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG340.30465949820788535No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG340.30465949820788535No Hit
TGGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG340.30465949820788535No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG330.2956989247311828No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG330.2956989247311828No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG330.2956989247311828No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG320.2867383512544803No Hit
TAGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG320.2867383512544803No Hit
AGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA320.2867383512544803No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG300.2688172043010753No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG300.2688172043010753No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC300.2688172043010753No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG300.2688172043010753No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG300.2688172043010753No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG290.25985663082437277No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG280.25089605734767023No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG270.24193548387096775No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC260.23297491039426527No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG260.23297491039426527No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG260.23297491039426527No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG260.23297491039426527No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC250.2240143369175627No Hit
TAGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG240.21505376344086022No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG230.2060931899641577No Hit
TGGCTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCA220.19713261648745523No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG220.19713261648745523No Hit
GTGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCG220.19713261648745523No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG210.1881720430107527No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG200.17921146953405018No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG200.17921146953405018No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG200.17921146953405018No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG200.17921146953405018No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC190.17025089605734767No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC190.17025089605734767No Hit
GGTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCACT190.17025089605734767No Hit
GTGGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACC190.17025089605734767No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC180.16129032258064516No Hit
AGAGTTTGATTATGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG180.16129032258064516No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG180.16129032258064516No Hit
GTGGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCC180.16129032258064516No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG180.16129032258064516No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG180.16129032258064516No Hit
TGGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCA180.16129032258064516No Hit
TGGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG170.15232974910394267No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC170.15232974910394267No Hit
AGGGTTTGATTATGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG170.15232974910394267No Hit
GTAGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCG170.15232974910394267No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC160.14336917562724014No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC160.14336917562724014No Hit
AGCTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA160.14336917562724014No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC150.13440860215053765No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG150.13440860215053765No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG150.13440860215053765No Hit
AGGGTTTGATTCTGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG150.13440860215053765No Hit
GGCTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC150.13440860215053765No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC150.13440860215053765No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG140.12544802867383512No Hit
GTAGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCG140.12544802867383512No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG140.12544802867383512No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG130.11648745519713263No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC130.11648745519713263No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC130.11648745519713263No Hit
TAGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG130.11648745519713263No Hit
TAGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT130.11648745519713263No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC130.11648745519713263No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC130.11648745519713263No Hit
TAGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACAT130.11648745519713263No Hit
TGTGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGC130.11648745519713263No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG130.11648745519713263No Hit
AGGGTTTGATTATGGCTCAGGACTGAACGCTGGCGGCGTGCCTAATACAT130.11648745519713263No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG130.11648745519713263No Hit
GGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT130.11648745519713263No Hit
TGTGGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGC130.11648745519713263No Hit
AGAGTTCGATTCTGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG130.11648745519713263No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG130.11648745519713263No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC130.11648745519713263No Hit
TAGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG130.11648745519713263No Hit
GTAGCTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACC130.11648745519713263No Hit
GGGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG120.10752688172043011No Hit
TGGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG120.10752688172043011No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG120.10752688172043011No Hit
AGGGTTTGATTCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACAT120.10752688172043011No Hit
AGGGTTTGATCCTGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG120.10752688172043011No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC120.10752688172043011No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC120.10752688172043011No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA120.10752688172043011No Hit
TAGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT120.10752688172043011No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA120.10752688172043011No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)