FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623122

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623122
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11574
Sequences flagged as poor quality0
Sequence length506-6217
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC5354.6224295835493345No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA2602.2464143770520133No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC2472.1340936581994123No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC2342.021772939346812No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1501.2960082944530846No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC1441.244167962674961No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1311.1318472438223603No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1221.0540867461551755No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1171.010886469673406No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC1130.9763262484879903No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG1100.9504060825989286No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT1050.9072058061171592No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGG1000.8640055296353897No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA950.8208052531536203No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG910.7862450319682046No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG910.7862450319682046No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC900.7776049766718507No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG900.7776049766718507No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT870.751684810782789No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG810.6998444790046656No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG800.6912044237083117No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC780.673924313115604No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC770.66528425781925No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG740.6393640919301884No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC740.6393640919301884No Hit
GGGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG720.6220839813374806No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG710.6134439260411266No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA690.5961638154484189No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG670.5788837048557111No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG640.5529635389666494No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA610.5270433730775878No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG590.5097632624848799No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC570.49248315189217207No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC570.49248315189217207No Hit
GGGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG540.46656298600311047No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT500.43200276481769484No Hit
GAGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGG430.37152237774321756No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG400.34560221185415585No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC400.34560221185415585No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC390.336962156557802No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA380.32832210126144806No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG370.3196820459650942No Hit
GGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC360.3110419906687403No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG350.30240193537238635No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT350.30240193537238635No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG350.30240193537238635No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG340.2937618800760325No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG330.2851218247796786No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC330.2851218247796786No Hit
GAGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG330.2851218247796786No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG320.2764817694833247No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG320.2764817694833247No Hit
GAGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG320.2764817694833247No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG320.2764817694833247No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG310.2678417141869708No Hit
GGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAA300.2592016588906169No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG290.250561603594263No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG290.250561603594263No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG290.250561603594263No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG290.250561603594263No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG290.250561603594263No Hit
CGGGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACG280.2419215482979091No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG280.2419215482979091No Hit
AGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC280.2419215482979091No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG280.2419215482979091No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG280.2419215482979091No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC270.23328149300155523No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT270.23328149300155523No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG270.23328149300155523No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC270.23328149300155523No Hit
GGGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG270.23328149300155523No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG270.23328149300155523No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA260.22464143770520134No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG260.22464143770520134No Hit
AGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA250.21600138240884742No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG250.21600138240884742No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG240.20736132711249353No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG240.20736132711249353No Hit
GAGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT240.20736132711249353No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT240.20736132711249353No Hit
GGCTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC240.20736132711249353No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG220.19008121651978574No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG220.19008121651978574No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG210.18144116122343182No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC210.18144116122343182No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG210.18144116122343182No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG210.18144116122343182No Hit
CGGGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCC210.18144116122343182No Hit
AGGGTTCGATCCTGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG210.18144116122343182No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG210.18144116122343182No Hit
GGCTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC200.17280110592707792No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG200.17280110592707792No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG200.17280110592707792No Hit
GGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA190.16416105063072403No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG190.16416105063072403No Hit
GAGGGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT190.16416105063072403No Hit
GGGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG190.16416105063072403No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC190.16416105063072403No Hit
GAGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACAT180.15552099533437014No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG180.15552099533437014No Hit
GGGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGG180.15552099533437014No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG180.15552099533437014No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG180.15552099533437014No Hit
GAGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT170.14688094003801624No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG170.14688094003801624No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC170.14688094003801624No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG170.14688094003801624No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA170.14688094003801624No Hit
GGGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAG170.14688094003801624No Hit
GCGGGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGC170.14688094003801624No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG170.14688094003801624No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG170.14688094003801624No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG170.14688094003801624No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG170.14688094003801624No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG170.14688094003801624No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG170.14688094003801624No Hit
GAGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACAT160.13824088474166235No Hit
GGTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGCT160.13824088474166235No Hit
GAGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACAT160.13824088474166235No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG160.13824088474166235No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC160.13824088474166235No Hit
AGGGTTCGATTCTGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG160.13824088474166235No Hit
GAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT160.13824088474166235No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG150.12960082944530846No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC150.12960082944530846No Hit
AGCTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC150.12960082944530846No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTAC150.12960082944530846No Hit
GAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACAT150.12960082944530846No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG150.12960082944530846No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG150.12960082944530846No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG150.12960082944530846No Hit
AGGGTTCGATCATGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG150.12960082944530846No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG150.12960082944530846No Hit
GAGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAA150.12960082944530846No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG140.12096077414895455No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA140.12096077414895455No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG140.12096077414895455No Hit
GCGGGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGAC140.12096077414895455No Hit
AGAGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG140.12096077414895455No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC140.12096077414895455No Hit
GAGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACAT140.12096077414895455No Hit
GAGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACAT140.12096077414895455No Hit
GGGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCG140.12096077414895455No Hit
GGGCTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGG140.12096077414895455No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCATCGGTTTTACCCTAGGTCGC130.11232071885260067No Hit
AGGGTTTGATCCTGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG130.11232071885260067No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC130.11232071885260067No Hit
CGAGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACG130.11232071885260067No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTCACCCTAGGCCGA130.11232071885260067No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG130.11232071885260067No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC130.11232071885260067No Hit
CGGGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAA130.11232071885260067No Hit
GAGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG130.11232071885260067No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG120.10368066355624676No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT120.10368066355624676No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG120.10368066355624676No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG120.10368066355624676No Hit
CGGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCG120.10368066355624676No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG120.10368066355624676No Hit
AGAGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG120.10368066355624676No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG120.10368066355624676No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)