FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5089
Sequences flagged as poor quality0
Sequence length526-3775
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC2865.61996462959324No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC2003.930045195519748No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1973.871094517586952No Hit
GGCTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC771.5130674002751032No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC761.4934171742975044No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG591.1593633326783257No Hit
GGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC571.1200628807231283No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA551.0807624287679307No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG541.0611122027903321No Hit
AGCTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC521.0218117508351345No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC521.0218117508351345No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC480.9432108469247396No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG470.923560620947141No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG470.923560620947141No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC460.9039103949695421No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG440.8646099430143446No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG420.8253094910591471No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG380.7467085871487522No Hit
GGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA370.7270583611711534No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG360.7074081351935547No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA360.7074081351935547No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC350.6877579092159559No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA350.6877579092159559No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG330.6484574572607585No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA330.6484574572607585No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG330.6484574572607585No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG310.609157005305561No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA300.5895067793279622No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC290.5698565533503636No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG280.5502063273727648No Hit
GGCTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC270.5305561013951661No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG270.5305561013951661No Hit
GGTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGCT270.5305561013951661No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG270.5305561013951661No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG260.5109058754175673No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG250.4912556494399685No Hit
AGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC250.4912556494399685No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG230.45195519748477103No Hit
GGTTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC230.45195519748477103No Hit
AGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA230.45195519748477103No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC220.4323049715071723No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA210.41265474552957354No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC210.41265474552957354No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC200.3930045195519749No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG200.3930045195519749No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG190.3733542935743761No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG190.3733542935743761No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA190.3733542935743761No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG180.35370406759677736No Hit
GGCTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC180.35370406759677736No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG180.35370406759677736No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG180.35370406759677736No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG180.35370406759677736No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG180.35370406759677736No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA180.35370406759677736No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG170.3340538416191786No Hit
GGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT170.3340538416191786No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC170.3340538416191786No Hit
AGCTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC170.3340538416191786No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG170.3340538416191786No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC170.3340538416191786No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG160.31440361564157987No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG160.31440361564157987No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG160.31440361564157987No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG160.31440361564157987No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT150.2947533896639811No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG150.2947533896639811No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG150.2947533896639811No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG150.2947533896639811No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG150.2947533896639811No Hit
GGCTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC140.2751031636863824No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG140.2751031636863824No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC140.2751031636863824No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG140.2751031636863824No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC130.25545293770878363No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG130.25545293770878363No Hit
GGCTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC120.2358027117311849No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG120.2358027117311849No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG120.2358027117311849No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG120.2358027117311849No Hit
AGTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGCT120.2358027117311849No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG120.2358027117311849No Hit
AGCTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC120.2358027117311849No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG120.2358027117311849No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG120.2358027117311849No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATG120.2358027117311849No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG120.2358027117311849No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA110.21615248575358614No Hit
GGTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCACT110.21615248575358614No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG110.21615248575358614No Hit
AGGGTTTGATTATGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG110.21615248575358614No Hit
AGGGTTTGATTCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACAT110.21615248575358614No Hit
AGTTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC110.21615248575358614No Hit
AGGGTTTGATCATGGCTCAGGACTGAACGCTGGCGGCGTGCCTAATACAT100.19650225977598745No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT100.19650225977598745No Hit
AGCTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC100.19650225977598745No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTCTTGCCCTAGGTCGC100.19650225977598745No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG100.19650225977598745No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG100.19650225977598745No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG100.19650225977598745No Hit
GGTTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC100.19650225977598745No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT100.19650225977598745No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG100.19650225977598745No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG90.17685203379838868No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC90.17685203379838868No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA90.17685203379838868No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG90.17685203379838868No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG90.17685203379838868No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT90.17685203379838868No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATG90.17685203379838868No Hit
AGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT90.17685203379838868No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG90.17685203379838868No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG90.17685203379838868No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATG90.17685203379838868No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG80.15720180782078993No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG80.15720180782078993No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG80.15720180782078993No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC80.15720180782078993No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG80.15720180782078993No Hit
AGGGTTTGATTCTGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG80.15720180782078993No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC80.15720180782078993No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG80.15720180782078993No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC70.1375515818431912No Hit
AGGGTTTGATCATGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG70.1375515818431912No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG70.1375515818431912No Hit
AGGGTTCGATCCTGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG70.1375515818431912No Hit
AGGGTTCGATTCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACAT70.1375515818431912No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG70.1375515818431912No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG70.1375515818431912No Hit
AGCTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC70.1375515818431912No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG70.1375515818431912No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC70.1375515818431912No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG70.1375515818431912No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG70.1375515818431912No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG70.1375515818431912No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG70.1375515818431912No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATG70.1375515818431912No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG70.1375515818431912No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG60.11790135586559244No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG60.11790135586559244No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCCG60.11790135586559244No Hit
GGTTACCTTGTTACGACTTAGTCCCAATCGCCGATCCCACCTTCGACAGC60.11790135586559244No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG60.11790135586559244No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC60.11790135586559244No Hit
AGAGTTTGATTCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACAT60.11790135586559244No Hit
AGGGTTCGATTATGGCTCAGGACTGAACGCTGGCGGCGTGCCTAATACAT60.11790135586559244No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA60.11790135586559244No Hit
AGGGTTTGATTATGGCTCAGGACTGAACGCTGGCGGCGTGCCTAATACAT60.11790135586559244No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC60.11790135586559244No Hit
AGGGTTTGATTCTGGCTCAGGACTGAACGCTGGCGGCGTGCCTAATACAT60.11790135586559244No Hit
AGTTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC60.11790135586559244No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG60.11790135586559244No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG60.11790135586559244No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATG60.11790135586559244No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG60.11790135586559244No Hit
AGGGTTTCGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACAT60.11790135586559244No Hit
AGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA60.11790135586559244No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG60.11790135586559244No Hit
GGTTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCATC60.11790135586559244No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG60.11790135586559244No Hit
AGGGTTTGATCCTGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG60.11790135586559244No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCATCGGTTTTACCCTAGGTCGC60.11790135586559244No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA60.11790135586559244No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)