FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623128

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623128
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13039
Sequences flagged as poor quality0
Sequence length499-5000
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC10437.999079684024848No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC7946.089424035585551No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG4833.704271799984661No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG4273.2747910115806427No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG2491.9096556484392975No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG2331.786946851752435No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC2031.5568678579645678No Hit
CGGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG1831.4034818621059897No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC1761.3497967635554875No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC1701.303780964797914No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1421.0890405705959045No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1300.9970089730807578No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC1290.9893396732878288No Hit
CAGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG1260.966331773909042No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC1140.8743001763938952No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1130.8666308766009663No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG1110.8512922770151085No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1080.8282843776363218No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG940.7209141805353171No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG930.7132448807423882No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG910.6979062811565304No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC910.6979062811565304No Hit
TCGGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAA830.6365518828130992No Hit
TCAGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAA820.6288825830201703No Hit
AGGGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG790.6058746836413835No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG770.5905360840555257No Hit
AGAGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG750.5751974844696679No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG710.5445202852979523No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG690.5291816857120945No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC680.5215123859191656No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG650.4985044865403789No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG620.47549658716159215No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG600.46015798757573434No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG580.4448193879898765No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG560.4294807884040187No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC560.4294807884040187No Hit
CAGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACAT550.42181148861108986No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC530.406472889025232No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG510.3911342894393742No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC480.36812639006058745No Hit
CGGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGG450.3451184906818007No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA410.31444129151008515No Hit
CAGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACAT410.31444129151008515No Hit
AGAGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG410.31444129151008515No Hit
AGAGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG410.31444129151008515No Hit
TCAGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACA400.30677199171715624No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG400.30677199171715624No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC380.29143339213129843No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA360.2760947925454406No Hit
CAGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACAT350.2684254927525117No Hit
AGGGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG350.2684254927525117No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG350.2684254927525117No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG350.2684254927525117No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA330.2530868931666539No Hit
AGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATGC330.2530868931666539No Hit
CGGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG330.2530868931666539No Hit
CGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAA330.2530868931666539No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG330.2530868931666539No Hit
AGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA320.24541759337372496No Hit
CTCGGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTA300.23007899378786717No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC300.23007899378786717No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC290.22240969399493826No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG290.22240969399493826No Hit
CGGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGG290.22240969399493826No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC270.20707109440908045No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG260.19940179461615154No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG260.19940179461615154No Hit
CAGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG260.19940179461615154No Hit
TCGGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCG250.19173249482322263No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG250.19173249482322263No Hit
CAGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACAT240.18406319503029372No Hit
CAGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGG240.18406319503029372No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG230.17639389523736482No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA230.17639389523736482No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG220.16872459544443594No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC220.16872459544443594No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG220.16872459544443594No Hit
CTCAGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTA210.16105529565150703No Hit
CAGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAA200.15338599585857812No Hit
GTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGCG200.15338599585857812No Hit
AGAGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG190.14571669606564921No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG190.14571669606564921No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG190.14571669606564921No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC190.14571669606564921No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC190.14571669606564921No Hit
AGTTACCTTGTTACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGT190.14571669606564921No Hit
CAGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGG190.14571669606564921No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG190.14571669606564921No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT180.1380473962727203No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG180.1380473962727203No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG180.1380473962727203No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTCGCTCTAGGCCGA180.1380473962727203No Hit
CAGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACAT180.1380473962727203No Hit
TCAGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACA180.1380473962727203No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG180.1380473962727203No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA170.1303780964797914No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC170.1303780964797914No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC170.1303780964797914No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG170.1303780964797914No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC160.12270879668686248No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG160.12270879668686248No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTCGCTCTAGGCCGA160.12270879668686248No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC160.12270879668686248No Hit
GGTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGCG150.11503949689393358No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC150.11503949689393358No Hit
AGAGTTTGATTCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACAT150.11503949689393358No Hit
TCGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAA150.11503949689393358No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCGACGCCACCTTCGACGAC150.11503949689393358No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG150.11503949689393358No Hit
GGTTACCTTGTTACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGT150.11503949689393358No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG140.10737019710100468No Hit
AGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATGC140.10737019710100468No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTCACCCTAGGCCGA140.10737019710100468No Hit
CAGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT140.10737019710100468No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCTACAGGCTTAACACATG140.10737019710100468No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG140.10737019710100468No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG140.10737019710100468No Hit
AGGGTTTGATTCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACAT140.10737019710100468No Hit
TCAGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACA140.10737019710100468No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG140.10737019710100468No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)