FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13946
Sequences flagged as poor quality0
Sequence length507-4279
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC5213.7358382331851425No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC3912.8036713035995984No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA3072.2013480567904775No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC2611.8715043740140542No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC2511.7997992255843969No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC2131.5273196615516995No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC2111.5129786318657679No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1691.2118170084612074No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA1611.1544528897174817No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG1581.1329413451885846No Hit
AGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA1571.1257708303456189No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG1491.0684067116018932No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1461.0468951670729958No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1451.03972465223003No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1411.0110425928581672No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1330.9536784741144414No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG1320.9465079592714757No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC1160.831779721784024No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG1120.8030976624121613No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTAGTTTTACCCTAAACAGC1120.8030976624121613No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1110.7959271475691955No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG1090.781586117883264No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1070.7672450881973326No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG990.7098809694536068No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG980.7027104546106411No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC920.6596873655528467No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG910.652516850709881No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG870.623834791338018No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG850.6094937616520867No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG840.6023232468091209No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC830.5951527319661551No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCGGCAGGCCTAACACATG830.5951527319661551No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA820.5879822171231894No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC770.5521296429083609No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTTTTACCCTAGGCAGC740.5306180983794637No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG730.5234475835364979No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC730.5234475835364979No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG690.494765524164635No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG670.4804244944787036No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG670.4804244944787036No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG670.4804244944787036No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA670.4804244944787036No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCACCAGACCTGCCTTCGGCAGC670.4804244944787036No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG650.4660834647927721No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG620.44457192026387493No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG620.44457192026387493No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG610.4374014054209092No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG590.4230603757349778No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC580.415889860892012No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA580.415889860892012No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG580.415889860892012No Hit
AGAGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG560.40154883120608065No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG530.3800372866771834No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC520.37286677183421774No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG520.37286677183421774No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC520.37286677183421774No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTACCCTAGGCCGA510.36569625699125197No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAACCCTGCCGTGGTAATC500.35852574214828625No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG500.35852574214828625No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCGGCAGGCCTAACACATG480.3441847124623548No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTAGTTTTACCCTAAACAGC460.32984368277642334No Hit
AGGGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG450.3226731679334576No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACCAT440.3155026530904919No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTCACCCTAGGCCGA430.30833213824752614No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG400.286820593718629No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC400.286820593718629No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC400.286820593718629No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCGGCAGGCCTAACACATG390.2796500788756633No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA390.2796500788756633No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC380.2724795640326975No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA380.2724795640326975No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGTCGC370.26530904918973186No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG370.26530904918973186No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG360.2581385343467661No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTTAGC360.2581385343467661No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC360.2581385343467661No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC350.2509680195038004No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG340.24379750466083464No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG330.23662698981786892No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTTTTACCCTAGGCAGC330.23662698981786892No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC330.23662698981786892No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG330.23662698981786892No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG330.23662698981786892No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC320.2294564749749032No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG310.22228596013193747No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTACCCTAGGCCGA310.22228596013193747No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC300.21511544528897175No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC300.21511544528897175No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCACCAGACCTGCCTTCGGCAGC300.21511544528897175No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG290.207944930446006No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAACCCTGCCGTGGTAATC280.20077441560304032No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCGGCAGGCCTAACACATG280.20077441560304032No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG280.20077441560304032No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTCACCCTAGGCCGA280.20077441560304032No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA280.20077441560304032No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC280.20077441560304032No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG270.19360390076007455No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG270.19360390076007455No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCCGCCCTGCCTTCGGCAGC270.19360390076007455No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG270.19360390076007455No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC260.18643338591710887No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC260.18643338591710887No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA250.17926287107414313No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG250.17926287107414313No Hit
AGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC250.17926287107414313No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTCGGCAGC250.17926287107414313No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCGCCCCGCCTTCGGCAGC250.17926287107414313No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTCACCCTAGGCCGA250.17926287107414313No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA240.1720923562311774No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCCTTACACATG240.1720923562311774No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGCAAGC240.1720923562311774No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG240.1720923562311774No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG230.16492184138821167No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG230.16492184138821167No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC220.15775132654524596No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACCAT220.15775132654524596No Hit
AGGGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG210.15058081170228022No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG210.15058081170228022No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACTAGTTTTACCCTAAACAGC200.1434102968593145No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCCTTACACATG200.1434102968593145No Hit
GGGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAG190.13623978201634876No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGTAAGC190.13623978201634876No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTGCCCTAGGCCGT190.13623978201634876No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG190.13623978201634876No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG190.13623978201634876No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTCGGCAGC190.13623978201634876No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTTAGC180.12906926717338305No Hit
AGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA180.12906926717338305No Hit
AGAGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG180.12906926717338305No Hit
AGGGTTTGATTATGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG180.12906926717338305No Hit
AGAGTTCGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG180.12906926717338305No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT180.12906926717338305No Hit
GGGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG170.12189875233041732No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGCAAGC170.12189875233041732No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG170.12189875233041732No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG170.12189875233041732No Hit
AGAGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACA170.12189875233041732No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTCTCGCCCTAGGCCGA170.12189875233041732No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCCTTACACATG170.12189875233041732No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG170.12189875233041732No Hit
AGAGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACA170.12189875233041732No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCGGCAGGCCTAACACATG160.1147282374874516No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATCCGCCCTGCCTTCGGCAGC160.1147282374874516No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG160.1147282374874516No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC160.1147282374874516No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG160.1147282374874516No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCGACGCCACCTTCGACGAC160.1147282374874516No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG160.1147282374874516No Hit
GGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAA160.1147282374874516No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG160.1147282374874516No Hit
AGAGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACA150.10755772264448588No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG150.10755772264448588No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTCTCGCCCTAGGCCGA150.10755772264448588No Hit
AGGGTTCGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG150.10755772264448588No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG150.10755772264448588No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG150.10755772264448588No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG150.10755772264448588No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA150.10755772264448588No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG140.10038720780152016No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG140.10038720780152016No Hit
AGAGTTTGATTATGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG140.10038720780152016No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT140.10038720780152016No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG140.10038720780152016No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGTAAGC140.10038720780152016No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)