FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11047
Sequences flagged as poor quality0
Sequence length500-4416
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC10509.504842943785643No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC6405.793428080021725No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG4253.847198334389427No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG3743.3855345342626957No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC2061.864759663256993No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1771.6022449533810084No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC1691.5298271023807368No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1601.4483570200054312No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1581.4302525572553635No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1551.4030958631302615No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1401.2673123925047525No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1341.2129990042545489No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA1311.1858423101294469No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG1241.1224766905042092No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG1211.0953199963791076No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1171.0591110708789717No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA1171.0591110708789717No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC1151.0410066081289038No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1111.0047976826287681No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC1100.995745451253734No Hit
AGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA1010.9142753688784285No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG880.7965963610029871No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG850.7694396668778855No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG800.7241785100027156No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG790.7151262786276817No Hit
AGAGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG770.6970218158776138No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA720.6517606590024441No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG650.5883950393772065No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC630.5702905766271386No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT620.5612383452521046No Hit
AGGGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG600.5431338825020368No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG560.506924957001901No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT560.506924957001901No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG560.506924957001901No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT540.4888204942518331No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT530.4797682628767991No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC530.4797682628767991No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC530.4797682628767991No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC530.4797682628767991No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG490.44355933737666337No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC460.4164026432515615No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG440.39829818050149357No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT430.38924594912645966No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC420.38019371775142574No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCACCAGACCTGCCTTCGGCAGC400.3620892550013578No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA390.3530370236263239No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC380.34398479225129No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG380.34398479225129No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG370.334932560876256No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG340.30777586675115415No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG330.29872363537612023No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC330.29872363537612023No Hit
AGAGTTTGATTATGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG330.29872363537612023No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG330.29872363537612023No Hit
AGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT330.29872363537612023No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC330.29872363537612023No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA320.28967140400108626No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG320.28967140400108626No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC320.28967140400108626No Hit
GGTTACCTTGTTACGACTTCACTCCAATCATCAGCTCCGCCTTCGACGGC320.28967140400108626No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG310.2806191726260523No Hit
GGTTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC310.2806191726260523No Hit
AGAGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG310.2806191726260523No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG310.2806191726260523No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG310.2806191726260523No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG300.2715669412510184No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG290.26251470987598446No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATTGATTCTACCTTCGACTGC290.26251470987598446No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG290.26251470987598446No Hit
CGGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG280.2534624785009505No Hit
GGTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGCT260.23535801575088258No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC250.22630578437584864No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG250.22630578437584864No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG240.2172535530008147No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC220.19914909025074679No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG220.19914909025074679No Hit
AGTTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC220.19914909025074679No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC210.19009685887571287No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG210.19009685887571287No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATTGATTCTACCTTCGACTGC210.19009685887571287No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG210.19009685887571287No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG210.19009685887571287No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG210.19009685887571287No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC210.19009685887571287No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG210.19009685887571287No Hit
AGGGTTTGATTATGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG210.19009685887571287No Hit
AGTTACCTTGTTACGACTTCACTCCAATCATCAGCTCCGCCTTCGACGGC200.1810446275006789No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG200.1810446275006789No Hit
AGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA200.1810446275006789No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCCGGCCTGCCTTCGACGGC200.1810446275006789No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATTAGCTCTGCCTTCGACTGC200.1810446275006789No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG200.1810446275006789No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG190.171992396125645No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG190.171992396125645No Hit
AGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGC190.171992396125645No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG190.171992396125645No Hit
AGGGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG190.171992396125645No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA190.171992396125645No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG190.171992396125645No Hit
AGTTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC190.171992396125645No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG190.171992396125645No Hit
AGGGTTTGATCATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG190.171992396125645No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA180.16294016475061102No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG180.16294016475061102No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA180.16294016475061102No Hit
CAGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT170.15388793337557707No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC170.15388793337557707No Hit
AGAGTTTGATTCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT170.15388793337557707No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC170.15388793337557707No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCACCAGACCTGCCTTCGGCAGC170.15388793337557707No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG160.14483570200054313No Hit
AGAGTTTGATTATGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG160.14483570200054313No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC160.14483570200054313No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC160.14483570200054313No Hit
CAGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG150.1357834706255092No Hit
AGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAACA150.1357834706255092No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG150.1357834706255092No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAACA150.1357834706255092No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCGGCAGGCCTAACACATG150.1357834706255092No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATCCGGCCTGCCTTCGACGGC150.1357834706255092No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG150.1357834706255092No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG150.1357834706255092No Hit
AGGGTTTGATTCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACAT140.12673123925047525No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG140.12673123925047525No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA140.12673123925047525No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATTAGCTCTGCCTTCGACTGC140.12673123925047525No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC130.11767900787544129No Hit
AGAGTTTGATCATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG130.11767900787544129No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA130.11767900787544129No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG130.11767900787544129No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG130.11767900787544129No Hit
AGGGTTTGATTATGGCTCAGGATGAATGCTGGCGGCGTGCCTAACACATG130.11767900787544129No Hit
CAGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT130.11767900787544129No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG120.10862677650040735No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTCGCTCTAGGCCGA120.10862677650040735No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGCAAGC120.10862677650040735No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)