FastQCFastQC Report
Fri 2 Sep 2022
EGAF00006623138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23100
Sequences flagged as poor quality0
Sequence length502-5096
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA13315.761904761904762No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC13195.70995670995671No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC9043.9134199134199132No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA8353.614718614718615No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG6742.9177489177489178No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG5722.4761904761904763No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG4531.961038961038961No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG4181.8095238095238095No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC3681.593073593073593No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG3341.445887445887446No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA3151.3636363636363635No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG3071.329004329004329No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG3031.3116883116883118No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG2971.2857142857142856No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC2601.1255411255411256No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA2571.1125541125541125No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC2441.0562770562770563No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC2311.0No Hit
AGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA1980.8571428571428572No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1820.787878787878788No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG1800.7792207792207793No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1680.7272727272727273No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC1660.7186147186147187No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC1640.70995670995671No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG1630.7056277056277056No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1610.6969696969696969No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG1550.670995670995671No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG1430.6190476190476191No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG1360.5887445887445888No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1340.5800865800865801No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG1260.5454545454545455No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT1170.5064935064935064No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC1160.5021645021645021No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG1100.4761904761904762No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC1080.4675324675324675No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1040.45021645021645024No Hit
AGAGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG990.4285714285714286No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA970.4199134199134199No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG930.40259740259740256No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG880.38095238095238093No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC870.37662337662337664No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT860.3722943722943723No Hit
AGGGTTTGATTATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG830.35930735930735935No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT830.35930735930735935No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG790.341991341991342No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG780.33766233766233766No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG770.33333333333333337No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG770.33333333333333337No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC750.3246753246753247No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG730.31601731601731603No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC730.31601731601731603No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC710.3073593073593074No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT690.29870129870129875No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA670.29004329004329005No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC660.2857142857142857No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG660.2857142857142857No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG650.2813852813852814No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA640.27705627705627706No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC640.27705627705627706No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG630.27272727272727276No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG630.27272727272727276No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG630.27272727272727276No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG600.2597402597402597No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG590.2554112554112554No Hit
AGTTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC580.2510822510822511No Hit
AGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT560.24242424242424243No Hit
AGAGTTTGATTATGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG550.2380952380952381No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA540.23376623376623376No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC530.22943722943722947No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG530.22943722943722947No Hit
AGGGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG530.22943722943722947No Hit
AGAGTTTGATTCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG520.22510822510822512No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG520.22510822510822512No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG500.21645021645021645No Hit
AGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA500.21645021645021645No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG490.21212121212121215No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG480.2077922077922078No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG480.2077922077922078No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC470.20346320346320348No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG470.20346320346320348No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC460.19913419913419914No Hit
AGGGTTTGATTATGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG460.19913419913419914No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG450.19480519480519481No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC440.19047619047619047No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG430.18614718614718614No Hit
AGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA420.18181818181818182No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG420.18181818181818182No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG410.1774891774891775No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT410.1774891774891775No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC410.1774891774891775No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC400.17316017316017315No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG390.16883116883116883No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT390.16883116883116883No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG390.16883116883116883No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC380.1645021645021645No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG370.16017316017316016No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC360.15584415584415584No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGC350.15151515151515152No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG350.15151515151515152No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATTAGCTCTGCCTTCGACTGC350.15151515151515152No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG350.15151515151515152No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG340.1471861471861472No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGC330.14285714285714285No Hit
CGGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGG330.14285714285714285No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCGACGCCACCTTCGACGAC330.14285714285714285No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT320.13852813852813853No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG320.13852813852813853No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTTTTACCCTAGGCAGC310.1341991341991342No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG310.1341991341991342No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCACCAGTCCTACCTTAGGCAGT310.1341991341991342No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG300.12987012987012986No Hit
GGTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGCT300.12987012987012986No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA300.12987012987012986No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCGCCCCGCCTTCGGCAGC300.12987012987012986No Hit
CGGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG300.12987012987012986No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTTGTTTTGCCTTGGGCAGC290.12554112554112554No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG290.12554112554112554No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG290.12554112554112554No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG290.12554112554112554No Hit
AGAGTTTGATCATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG290.12554112554112554No Hit
CAGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCG290.12554112554112554No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCACCAGACCTGCCTTCGGCAGC290.12554112554112554No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTTGCCCTAGGCCG280.12121212121212122No Hit
AGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC280.12121212121212122No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG280.12121212121212122No Hit
GGTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGAT270.11688311688311688No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG270.11688311688311688No Hit
AGGGTTTGATTCTGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG270.11688311688311688No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG260.11255411255411256No Hit
AGAGTTTGATTCTGGCTCAGAGTGAACGCTGGCGGCGTGCCTAATACATG260.11255411255411256No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG250.10822510822510822No Hit
GGTTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC250.10822510822510822No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG250.10822510822510822No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC250.10822510822510822No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG240.1038961038961039No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG240.1038961038961039No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT240.1038961038961039No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGCC240.1038961038961039No Hit
AGGGTTTGATCATGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATG240.1038961038961039No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC240.1038961038961039No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG240.1038961038961039No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)