FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623140

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623140
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6078
Sequences flagged as poor quality0
Sequence length500-4128
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC3746.153339914445541No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC1973.241197762421849No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC1502.4679170779861797No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC1502.4679170779861797No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG1191.9578808818690359No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA1111.826258637709773No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG1061.7439947351102336No Hit
AGAGTTCGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG871.4313919052319843No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC841.3820335636722607No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA831.3655807831523528No Hit
AGAGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG821.3491280026324448No Hit
AGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA671.102336294833827No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG651.0694307337940112No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC560.9213557091148403No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA510.839091806515301No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG480.7897334649555774No Hit
GGTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGCG460.7568279039157618No Hit
AGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA460.7568279039157618No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC450.7403751233958539No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG410.6745640013162224No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC390.6416584402764067No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG380.6252056597564989No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG380.6252056597564989No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA350.5758473181967753No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG340.5593945376768674No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG340.5593945376768674No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG330.5429417571569595No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG310.5100361961171438No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA310.5100361961171438No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG310.5100361961171438No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA270.4442250740375123No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG260.42777229351760443No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTCTTGCCCTAGGTCGC260.42777229351760443No Hit
AGAGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG260.42777229351760443No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG260.42777229351760443No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC250.4113195129976966No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG220.361961171437973No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG210.3455083909180652No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG210.3455083909180652No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC200.3290556103981573No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC190.31260282987824944No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG180.29615004935834155No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCTACAGGCTTAACACATG180.29615004935834155No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTGGCTACAGGCTTAACACATG170.2796972688384337No Hit
AGTTACCTTGTTACGACTTAGACACACACGCACATGGTTACCTTGTTACG170.2796972688384337No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG160.2632444883185258No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG160.2632444883185258No Hit
AGAGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG160.2632444883185258No Hit
AGAGTTCGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG160.2632444883185258No Hit
GGTTACCTTGTTACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGT160.2632444883185258No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG150.24679170779861795No Hit
AGCTACCTTGTTACGACTTAGACACACACGCACATGGTTACCTTGTTACG150.24679170779861795No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC150.24679170779861795No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG150.24679170779861795No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG150.24679170779861795No Hit
AGGGTTCGATTCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACAT130.21388614675880221No Hit
GGTTACCTTGTTACGACTTCACCCTCCTTACCAAACGTACCTTCGGCACC130.21388614675880221No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG130.21388614675880221No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG130.21388614675880221No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG130.21388614675880221No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA120.19743336623889435No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG120.19743336623889435No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCGGTCTTGCCCTAGGTCGC120.19743336623889435No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG120.19743336623889435No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC120.19743336623889435No Hit
AGCTACCTTGTTACGACTTAGACACACACGCACATGGCTACCTTGTTACG120.19743336623889435No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG120.19743336623889435No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTGGCTACAGGCTTAACACATG120.19743336623889435No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG110.1809805857189865No Hit
AGGGTTCGATTCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACAT110.1809805857189865No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG110.1809805857189865No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAACCCTACCGTGGTAATC110.1809805857189865No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG110.1809805857189865No Hit
AGTTACCTTGTTACGACTTAGACACACACGCACATAGTTACCTTGTTACG110.1809805857189865No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTCTTGCCCTAGGTCGC110.1809805857189865No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG110.1809805857189865No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG100.16452780519907864No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG100.16452780519907864No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG100.16452780519907864No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC100.16452780519907864No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGGCTACAGGCTTAACACATG100.16452780519907864No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA100.16452780519907864No Hit
GGCTACCTTGTTACGACTTCACCCTCCTTACCAAACGTACCTTCGGCACC100.16452780519907864No Hit
GGCTACCTTGTTACGACTTAGACACACACGCACATGGCTACCTTGTTACG100.16452780519907864No Hit
AGAGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG90.14807502467917077No Hit
AGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATGC90.14807502467917077No Hit
AGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATGC90.14807502467917077No Hit
AGGGTTCGATCCTGGCTCAGAACGAACGCTGGCGGCGCGTCTTAAGCATG90.14807502467917077No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTAGTTTTACCCTAAACAGC90.14807502467917077No Hit
AGCTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC90.14807502467917077No Hit
AGGGTTTCGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACAT80.1316222441592629No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTCTTGCCCTAGGTCGC80.1316222441592629No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG80.1316222441592629No Hit
AGTTACCTTGTTACGACTTAGACACACACGCACATGGCTACCTTGTTACG80.1316222441592629No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG80.1316222441592629No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCGACGCCACCTTCGACGAC80.1316222441592629No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGGCTACAGGCTTAACACATG80.1316222441592629No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCGGCAGGCCTAACACATG80.1316222441592629No Hit
AGGGTTCGATCATGGCTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCGG80.1316222441592629No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG80.1316222441592629No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC80.1316222441592629No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG80.1316222441592629No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC70.11516946363935504No Hit
GGTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCAT70.11516946363935504No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTGCCCTAGGCCGT70.11516946363935504No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGGCTACAGGCTTAACACATG70.11516946363935504No Hit
GGTTACCTTGTTACGACTTAGACACACACGCACATGGCTACCTTGTTACG70.11516946363935504No Hit
GGTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGAT70.11516946363935504No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG70.11516946363935504No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG70.11516946363935504No Hit
AGTTACCTTGTTACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGT70.11516946363935504No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG70.11516946363935504No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG70.11516946363935504No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTCGCTCTAGGCCGA70.11516946363935504No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG70.11516946363935504No Hit
AGTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGCG70.11516946363935504No Hit
GGCTACCTTGTTACGACTTAGACACACACGCACATGGTTACCTTGTTACG70.11516946363935504No Hit
AGAGTTCGATCATGGCTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCGG70.11516946363935504No Hit
AGGGTTCGATTCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACAT70.11516946363935504No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)