FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623141

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623141
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10204
Sequences flagged as poor quality0
Sequence length507-3774
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA3653.57702861622893No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC3213.1458251666013326No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA3193.126225009800079No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC2542.48921991375931No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA2182.136417091336731No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG2052.009016072128577No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1871.8326146609172873No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1841.803214425715406No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1791.7542140337122696No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1741.7052136417091337No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA1701.6660133281066247No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1691.6562132497059976No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA1661.6268130145041162No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC1641.6072128577028617No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1621.5876127009016072No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1441.4112112896903175No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1271.244609956879655No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1271.244609956879655No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG1161.1368090944727558No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA1151.1270090160721284No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1151.1270090160721284No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1101.0780086240689926No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG980.9604076832614661No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA980.9604076832614661No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC940.9212073696589572No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG890.8722069776558212No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG870.8526068208545668No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG810.7938063504508036No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG800.7840062720501764No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG770.7546060368482947No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG750.7350058800470404No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG710.6958055664445316No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG680.6664053312426499No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC620.6076048608388867No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC550.5390043120344963No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG530.5194041552332418No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG500.4900039200313603No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG480.4704037632301058No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG450.44100352802822423No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG430.4214033712269698No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG410.4018032144257154No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG400.3920031360250882No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG390.382203057624461No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG390.382203057624461No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT360.3528028224225794No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC360.3528028224225794No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGCCCCCACCTTCGACGGC350.3430027440219522No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG330.32340258722069776No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT330.32340258722069776No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG320.31360250882007057No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG320.31360250882007057No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG280.27440219521756176No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC270.2646021168169345No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG270.2646021168169345No Hit
GGTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGAT260.25480203841630733No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG230.22540180321442574No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC230.22540180321442574No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG230.22540180321442574No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC230.22540180321442574No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT230.22540180321442574No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC230.22540180321442574No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG220.2156017248137985No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG210.20580164641317128No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG200.1960015680125441No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC200.1960015680125441No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG200.1960015680125441No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT190.1862014896119169No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG180.1764014112112897No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTCACCAGTTTTGCCCTAGGCCG180.1764014112112897No Hit
GGTTACCTTGTTACGACTTCACGCACACACGCGCGCTATATGGTTACCTT180.1764014112112897No Hit
AGCTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC180.1764014112112897No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG170.16660133281066247No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC170.16660133281066247No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG160.15680125441003528No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG160.15680125441003528No Hit
AGTTACCTTGTTACGACTTCACGCACACGCGCGCTATATGGTTACCTTGT160.15680125441003528No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG160.15680125441003528No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG150.14700117600940807No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC150.14700117600940807No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGTCGC150.14700117600940807No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACCGGTATTACCCTAGTGCGC140.13720109760878088No Hit
GGTTACCTTGTTACGACTTCACGCACACGCGCGCTATATGGTTACCTTGT140.13720109760878088No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC140.13720109760878088No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG140.13720109760878088No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG140.13720109760878088No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTCACCAGTTTTGCCCTAGGCCG140.13720109760878088No Hit
AGCTACCTTGTTACGACTTCACGCACACGCGCGCTATATGGTTACCTTGT140.13720109760878088No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC130.12740101920815367No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG130.12740101920815367No Hit
GGCTACCTTGTTACGACTTAGTCCCAATCACCAATCCCACCTTCGACGGC130.12740101920815367No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC130.12740101920815367No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC120.11760094080752645No Hit
GGTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGCT120.11760094080752645No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTCACCAGTTTTGCCCTAGGCCG120.11760094080752645No Hit
AGTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGAT120.11760094080752645No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG120.11760094080752645No Hit
GGTTACCTTGTTACGACTTCACGCACACGCGCGCTATATGGCTACCTTGT120.11760094080752645No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG120.11760094080752645No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG120.11760094080752645No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA110.10780086240689925No Hit
GGTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGAT110.10780086240689925No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG110.10780086240689925No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG110.10780086240689925No Hit
AGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATGC110.10780086240689925No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG110.10780086240689925No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG110.10780086240689925No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGTCGC110.10780086240689925No Hit
GGCTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC110.10780086240689925No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC110.10780086240689925No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG110.10780086240689925No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTTGCCCTAGGCCG110.10780086240689925No Hit
AGGGTTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACAT110.10780086240689925No Hit
GGCTACCTTGTTACGACTTCACGCACACGCGCGCTATATGGTTACCTTGT110.10780086240689925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)