FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9430
Sequences flagged as poor quality0
Sequence length521-3219
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC4895.185577942735949No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC3663.8812301166489926No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC2342.481442205726405No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC2092.2163308589607635No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC1791.8981972428419935No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1221.2937433722163307No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1111.1770943796394486No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC1091.1558854718981972No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1031.0922587486744433No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG850.9013785790031814No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG790.8377518557794273No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG790.8377518557794273No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA790.8377518557794273No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG770.8165429480381761No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC630.6680805938494168No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG560.5938494167550371No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG550.5832449628844115No Hit
GGCTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC550.5832449628844115No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG540.5726405090137857No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG540.5726405090137857No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG530.5620360551431601No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA520.5514316012725344No Hit
AGGGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG510.5408271474019088No Hit
AGAGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG510.5408271474019088No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG500.5302226935312832No Hit
AGGGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG490.5196182396606575No Hit
GGCTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC480.5090137857900319No Hit
GGCTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC450.47720042417815484No Hit
AGGGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG450.47720042417815484No Hit
AGGGTTTGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG440.46659597030752914No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA430.4559915164369035No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG410.43478260869565216No Hit
GGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC410.43478260869565216No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG410.43478260869565216No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC400.4241781548250266No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG390.4135737009544008No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA390.4135737009544008No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG390.4135737009544008No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG370.3923647932131495No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG360.38176033934252385No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG360.38176033934252385No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG350.3711558854718982No Hit
GGTTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC350.3711558854718982No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG340.3605514316012725No Hit
GGCTACCTTGTTACGACTTCACCCCAGTTATCGACGCCACCTTCGACGAC330.34994697773064687No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA330.34994697773064687No Hit
GGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA320.3393425238600212No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG320.3393425238600212No Hit
AGAGTTTGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG320.3393425238600212No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG310.3287380699893956No Hit
AGAGTTTGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG300.3181336161187699No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA290.3075291622481442No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG290.3075291622481442No Hit
GGTTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC290.3075291622481442No Hit
GGCTACCTTGTTACGACTTCACCCCAATCACTATTCACACCTTCATTACC290.3075291622481442No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG280.29692470837751855No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA270.28632025450689286No Hit
AGCTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC270.28632025450689286No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATTTGTTTTGCCTTGGGCAGC270.28632025450689286No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCACCTTCCCCACCTTAGACGGC260.2757158006362672No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATTCACACCTTCATTACC260.2757158006362672No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG260.2757158006362672No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG250.2651113467656416No Hit
AGAGTTCGATTCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG250.2651113467656416No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG250.2651113467656416No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG250.2651113467656416No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG250.2651113467656416No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG250.2651113467656416No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG250.2651113467656416No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG240.25450689289501593No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA230.24390243902439024No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG230.24390243902439024No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC230.24390243902439024No Hit
GGGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG230.24390243902439024No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA230.24390243902439024No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA230.24390243902439024No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC230.24390243902439024No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCAGTTTTACCCTAGGCCGA220.23329798515376457No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC220.23329798515376457No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG220.23329798515376457No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC220.23329798515376457No Hit
GGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT210.2226935312831389No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCGACGCCACCTTCGACGAC210.2226935312831389No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG210.2226935312831389No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA210.2226935312831389No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG210.2226935312831389No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC210.2226935312831389No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA200.2120890774125133No Hit
AGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC200.2120890774125133No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG200.2120890774125133No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTGCCCTAGGCCGT200.2120890774125133No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAGCCCTACCGTGGTAAGC200.2120890774125133No Hit
AGCTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC200.2120890774125133No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG200.2120890774125133No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG200.2120890774125133No Hit
AGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA190.20148462354188762No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG190.20148462354188762No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG190.20148462354188762No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG190.20148462354188762No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT190.20148462354188762No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG180.19088016967126192No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA180.19088016967126192No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG180.19088016967126192No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTGCCCTAGGCCGT170.18027571580063625No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG170.18027571580063625No Hit
AGCTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC170.18027571580063625No Hit
AGCTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC170.18027571580063625No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG170.18027571580063625No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAGCCCTACCGTGGTAAGC170.18027571580063625No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG170.18027571580063625No Hit
GGCTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC170.18027571580063625No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCACCTTCCCCACCTTAGACGGC170.18027571580063625No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT170.18027571580063625No Hit
AGGGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG170.18027571580063625No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCACCTTCCCCACCTTAGACGGC170.18027571580063625No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC170.18027571580063625No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTTGTTTTGCCTTGGGCAGC160.1696712619300106No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG160.1696712619300106No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCAGTTTTACCCTAGGCCGA160.1696712619300106No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAGCCCTACCGTGGTAAGC160.1696712619300106No Hit
GGCTACCTTGTTACGACTTCACCCTCCTTACCAAACGTACCTTCGGCACC160.1696712619300106No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATG160.1696712619300106No Hit
GGTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGCT150.15906680805938495No Hit
AGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA150.15906680805938495No Hit
AGTTACCTTGTTACGACTTCACCCCAATCACTATTCACACCTTCATTACC150.15906680805938495No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG150.15906680805938495No Hit
AGAGTTCGATTATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG150.15906680805938495No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG150.15906680805938495No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG150.15906680805938495No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG140.14846235418875928No Hit
AGTTACCTTGTTACGACTTAGTCCCAATCGCCAATCCCACCTTAGACGGC140.14846235418875928No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG140.14846235418875928No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG140.14846235418875928No Hit
GGGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGG130.1378579003181336No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG130.1378579003181336No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC130.1378579003181336No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG130.1378579003181336No Hit
AGAGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG130.1378579003181336No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG130.1378579003181336No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG130.1378579003181336No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG120.12725344644750797No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG120.12725344644750797No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC120.12725344644750797No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG120.12725344644750797No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC120.12725344644750797No Hit
GGCTACCTTGTTACGACTTCACCCCCCTCACGGGGCGTACCTTCGACAGC120.12725344644750797No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAGCCCTACCGTGGTAAGC120.12725344644750797No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG120.12725344644750797No Hit
AGTTACCTTGTTACGACTTCACCCCCCTTACCAACCACACCTTCGGCGTC120.12725344644750797No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCCATCCCACCTTAGGCGGC110.11664899257688228No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG110.11664899257688228No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATG110.11664899257688228No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG110.11664899257688228No Hit
AGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA110.11664899257688228No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG110.11664899257688228No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC110.11664899257688228No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC110.11664899257688228No Hit
AGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA110.11664899257688228No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC100.10604453870625664No Hit
AGAGTTCGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG100.10604453870625664No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG100.10604453870625664No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACTAGTTTTACCCTAAACAGC100.10604453870625664No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATTGATTCTACCTTCGACTGC100.10604453870625664No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGATCCCACCGTGGGCGGC100.10604453870625664No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG100.10604453870625664No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA100.10604453870625664No Hit
AGCTACCTTGTTACGACTTCACCCCAATCACTATTCACACCTTCATTACC100.10604453870625664No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG100.10604453870625664No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG100.10604453870625664No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG100.10604453870625664No Hit
AGGGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG100.10604453870625664No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTGGCGGCGCGCCTAACACATG100.10604453870625664No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG100.10604453870625664No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG100.10604453870625664No Hit
AGAGTTTGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG100.10604453870625664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)