FastQCFastQC Report
Thu 1 Sep 2022
EGAF00006623147

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006623147
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16473
Sequences flagged as poor quality0
Sequence length515-3339
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC6023.654464881928003No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC5983.630182723244096No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA4602.792448248649305No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA4332.628543677532933No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG3241.966854853396467No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG3051.8515145996479088No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG2751.6693984095186063No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC2711.645116250834699No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC2461.4933527590602804No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG2081.2626722515631639No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC2021.2262490135373034No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1981.2019668548533966No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1921.165543616827536No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC1781.0805560614338616No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC1761.068414982091908No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC1731.0502033630789778No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC1651.0016390457111637No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1630.9894979663692103No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGC1630.9894979663692103No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1590.9652158076853032No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG1530.9287925696594427No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1490.9045104109755358No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA1440.874157712620652No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA1330.8073817762399077No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA1310.7952406968979543No Hit
GGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA1300.7891701572269774No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA1250.7588174588720937No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1240.752746919201117No Hit
GGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA1240.752746919201117No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1230.7466763795301402No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGA1230.7466763795301402No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG1210.7345353001881868No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG1200.72846476051721No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1180.7163236811752565No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG1080.655618284465489No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC840.509925332362047No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC830.5038547926910703No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT830.5038547926910703No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT820.4977842530200935No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG800.48564317367814No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGTCGC780.47350209433618645No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC780.47350209433618645No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC770.4674315546652098No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG760.461361014994233No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT750.4552904753232562No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG730.44314939598130276No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG720.437078856310326No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG700.42493777696837254No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG690.4188672372973957No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC690.4188672372973957No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG680.41279669762641896No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT660.4006556182844655No Hit
AGGGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG630.3824439992715352No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG610.37030291992958175No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC580.3520913009166515No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC580.3520913009166515No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG570.34602076124567477No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG550.33387968190372125No Hit
AGTTACCTTGTTACGACTTCACCCCAATCATCTGTCCCACCGTGACCGGC550.33387968190372125No Hit
AGGGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG540.3278091422327445No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG530.32173860256176773No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG530.32173860256176773No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG510.30959752321981426No Hit
AGAGTTCGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG500.3035269835488375No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG500.3035269835488375No Hit
GGTTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA490.29745644387786074No Hit
GGTTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA470.2853153645359072No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG470.2853153645359072No Hit
AGCTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA450.2731742851939537No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAAGCATACCGTGGTAAGC450.2731742851939537No Hit
GGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCAA430.26103320585200024No Hit
AGCTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA430.26103320585200024No Hit
AGGGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG420.2549626661810235No Hit
GGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCAA410.24889212651004675No Hit
AGAGTTCGATTCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG400.24282158683907No Hit
AGAGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG400.24282158683907No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG390.23675104716809323No Hit
GGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA390.23675104716809323No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG380.2306805074971165No Hit
AGGGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG380.2306805074971165No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG380.2306805074971165No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG370.22460996782613973No Hit
AGGGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG370.22460996782613973No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG360.218539428155163No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG360.218539428155163No Hit
AGGGTTCGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG360.218539428155163No Hit
AGTTACCTTGTTACGACTTAGCCCCAGTCACCTGTATTACCCTAGGCCGA350.21246888848418627No Hit
AGGGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG350.21246888848418627No Hit
GGCTACCTTGTTACGACTTAACCCCAATCATGCCCCCCACCTTAGGCCGA350.21246888848418627No Hit
AGAGTTCGATTCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG350.21246888848418627No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA350.21246888848418627No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG340.20639834881320948No Hit
AGAGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG340.20639834881320948No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG330.20032780914223275No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCGGTTTTACCCTAGGCCGA310.18818672980027926No Hit
AGAGTTCGATCATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG310.18818672980027926No Hit
AGGGTTTGATTATGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG300.1821161901293025No Hit
AGAGTTCGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG300.1821161901293025No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG290.17604565045832574No Hit
GGCTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC280.16997511078734898No Hit
GGTTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC280.16997511078734898No Hit
GGCTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC280.16997511078734898No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG280.16997511078734898No Hit
AGGGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG280.16997511078734898No Hit
AGAGTTCGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG270.16390457111637224No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG270.16390457111637224No Hit
AGAGTTTGATTATGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATG270.16390457111637224No Hit
AGAGTTCGATTATGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG260.15783403144539548No Hit
AGAGTTCGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG260.15783403144539548No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT260.15783403144539548No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC260.15783403144539548No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC250.15176349177441875No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATGAATCATACCGTGGTAAAC250.15176349177441875No Hit
AGCTACCTTGTTACGACTTCACCCCAATCATCGACTTTACCTTAGACGGC250.15176349177441875No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG250.15176349177441875No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG240.145692952103442No Hit
GGTACCTTGTTACGACTTCACCCCAATCATCTATCCCACCTTAGGCGGCT240.145692952103442No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC240.145692952103442No Hit
AGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG240.145692952103442No Hit
GGCTACCTTGTTACGACTTCACCCCAGTTATCCTCCCTGCCTTCGGCAGC240.145692952103442No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG240.145692952103442No Hit
GGTTACCTTGTTACGACTTCGTCCCAATCGCCAATCCCACCTTCGACCAC240.145692952103442No Hit
AGGGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG240.145692952103442No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG230.13962241243246526No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG230.13962241243246526No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC230.13962241243246526No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGGTACC230.13962241243246526No Hit
AGGGTTCGATTCTGGCTCAGGATGAACGCTAGCTATAGGCTTAACACATG230.13962241243246526No Hit
AGGGTTCGATCATGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG220.1335518727614885No Hit
AGAGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG220.1335518727614885No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGT220.1335518727614885No Hit
AGTTACCTTGTTACGACTTAGCCCCAATTACCAGTTTTGCCCTAGGCCGA220.1335518727614885No Hit
AGGGTTTGATCATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG210.12748133309051174No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCATCAGTCCTGCCTTCGGCAGC210.12748133309051174No Hit
AGGGTTTGATCATGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG210.12748133309051174No Hit
AGGGTTCGATTATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG200.121410793419535No Hit
GGTTACCTTGTTACGACTTCACCCCAGTCATTAACCCTACCTTCGACGCC200.121410793419535No Hit
AGAGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG200.121410793419535No Hit
AGTTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCAA200.121410793419535No Hit
AGTTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT200.121410793419535No Hit
AGCTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCAA190.11534025374855825No Hit
GGTTACCTTGTTACGACTTAGCCCCAGTCACTGGTATTACCCTTAAGCGC190.11534025374855825No Hit
GGTTACCTTGTTACGACTTCACCCCAATCATTAGCTCTGCCTTCGACTGC190.11534025374855825No Hit
GGTTACCTTGTTACGACTTCACCCCAATCACTATCCACACCTTAGATGCT190.11534025374855825No Hit
AGCTACCTTGTTACGACTTCACCCCAGTCATTGGTTTTGCCTTAGGCGAT190.11534025374855825No Hit
GGCTACCTTGTTACGACTTCACCCCAGTCGCTGATTCCACTGTGGACGGT190.11534025374855825No Hit
GGCTACCTTGTTACGACTTCACCCCAATCATTAGCTCTGCCTTCGACTGC180.1092697140775815No Hit
AGCTACCTTGTTACGACTTCACCCCAATCGCTAATCACACCCTCGGAGCA180.1092697140775815No Hit
GGTACCTTGTTACGACTTAGCCCCAATCACCAGTTTTGCCCTAGGCCGAT180.1092697140775815No Hit
AGGGTTTGATCCTGGCTCAGGATGAACGCTGACAGAATGCTTAACACATG180.1092697140775815No Hit
AGAGTTTGATCATGGCTCAGGATGAACGCTAGCGATAGGCTTAACACATG180.1092697140775815No Hit
AGGGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG180.1092697140775815No Hit
AGTTACCTTGTTACGACTTGACCCCAATCACTAGTCCTACCTTCGACGGC180.1092697140775815No Hit
GGCTACCTTGTTACGACTTAGCCCCAGTCACTAGTTTTACCCTAAACAGC170.10319917440660474No Hit
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG170.10319917440660474No Hit
GGTTACCTTGTTACGACTTCACCCCAGTTATCCGCCCCGCCTTCGGCAGC170.10319917440660474No Hit
GGCTACCTTGTTACGACTTCACCCCAATCACTATTCACACCTTAGATACC170.10319917440660474No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)