FastQCFastQC Report
Wed 16 Nov 2022
EGAF00006627159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006627159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences127353601
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGTACCAATCTCGTAT38288763.006492136802634TruSeq Adapter, Index 15 (97% over 37bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGTACCAATCTCGTA2086760.16385559447196157TruSeq Adapter, Index 15 (97% over 37bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)