FastQCFastQC Report
Wed 16 Nov 2022
EGAF00006627184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006627184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85653710
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10317491.2045584481979823No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAAAAAAAAAAAAAAA9324231.0885961623845597No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTAAAAAAAAAAAAAAAA8233860.9612963641621595No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGAAAATTTAAAAAAAAAAAAAAAA4313190.5035613752165552No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAAAAAAAAAAAAAAAA3945140.46059184126408537No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAACCGAAGGTGTAGATC3444400.4021308592470776Illumina Single End PCR Primer 1 (97% over 34bp)
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTAAAAAAAAAAAAAAAAA2198650.2566905741736114No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAAAAAAAAAAAAAA1921980.22438957985591051No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)