FastQCFastQC Report
Wed 16 Nov 2022
EGAF00006627222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006627222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75161531
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTGGGTTTTTTTTTTTTT5957270.7925956164996161No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTGGTTTTTTTTTTTTT4622210.6149701766985028No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3847730.511928103220782No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTGGGGTTTTTTTTTTTT1599840.21285356733885585No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTGGGGTTTTTTTTTTTTT1229130.1635317939438993No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTGGGTTTTTTTTTTTT806280.10727296121735466No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGTTTGGGTTTTTTTTTTTTT756680.10067384071780017No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)