FastQCFastQC Report
Wed 16 Nov 2022
EGAF00006627531

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006627531
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106274846
Sequences flagged as poor quality0
Sequence length35-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2562940.241161488015706No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1759520.1655631662830168No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1203000.11319705887882445No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)