FastQCFastQC Report
Wed 16 Nov 2022
EGAF00006627546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006627546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97580153
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC2199040.22535730190953893No Hit
CAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAA1799760.18443914512001225No Hit
CTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTC1752750.17962156710289232No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)