FastQCFastQC Report
Fri 10 May 2024
EGAF00006692654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006692654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10438542
Total Bases584.5 Mbp
Sequences flagged as poor quality0
Sequence length56
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN194970.1867789582108306No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG121960.11683624015691081No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)