FastQCFastQC Report
Wed 8 May 2024
EGAF00006692664

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006692664
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16149600
Total Bases892.4 Mbp
Sequences flagged as poor quality0
Sequence length33-56
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN382500.23684797146678555No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG167840.10392827066924258No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)