FastQCFastQC Report
Sat 25 May 2024
EGAF00006692731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006692731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92477083
Total Bases11.6 Gbp
Sequences flagged as poor quality0
Sequence length126
%GC29

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTCCCCTACTCATCGCACTAATTTACACTCACAACACCCTAGGCTCA1090550.11792651375043912No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)