FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006712214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006712214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44850884
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA520490.11604899470877765No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA484910.10811604070055789No Hit
CCACCTACTAAGAACGGCCATGCACCAC460300.10262896936434965No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)