FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006717088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006717088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125337780
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGAGGT3562532828.423455401874836No Hit
CGGTCCCA3191194125.460751738222903No Hit
GTCCTAAC2891363523.068571184203197No Hit
TATAGTTG2734348421.815835576471834No Hit
TATAGTTA2626280.2095361829449987No Hit
CGGTCCAA1264950.10092328107295341No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)